Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0162 ATGCAAAACTACAGGTCCAGTATTGTAGGCCCAATGGGCCACTACAAAGAAAACATTGGAAAAATCAAATTCAGTATTTTGTGCTCTTTCTGTAGTAAGATGAGCCACTCAGAGGAGAACAAAGAAGCACCAGTTCCAGAAAACCGACCAGTTCCTCGTTTAAATGAAAGGATTCTTTCATCTCTGTCAAGGAGATCAGTTGCTGCTCACCCCTGGCACGATCTTGAAATTGGACCTGGAGCTCCCAATATTTTCAATTGTGTTGTGGAGATTACAAAGGGAAGCAAGGTGAAATATGAACTTGACAAGAAGACTGGATTGATTAAGGTTGACCGGGTCTTGTACTCATCTGTTGTTTATCCTCATAACTATGGCTTTATCCCTCGTACACTGTGTGAAGACAACGATCCACTCGATGTCCTGATTATAATGCAGGAGCCAGTTCTTCCTGGTTGTTTCCTACGAGCCAAGGCCATTGGGTTGATGCCCATGATCGACCAGGGAGAGAAGGATGATAAGATTATTGCAGTATGTGCCGATGATCCAGAGTACAAGCACTATAATGACATCAAAGATCTTCCACCTCATCGTCTCTCCGAGATTCGACGCTTCTTTGAAGACTATAAGAAGAATGAGAACAAGGAGGTGGCTGTTAATGACTTTTTGCCTTCAACCACTGCTGTTGAAGCCATCCAATATTCAATGGATCTTTACGCGGAGTATATTCTGCACACCTTGAGGAGATAG 747 0.4311 MQNYRSSIVGPMGHYKENIGKIKFSILCSFCSKMSHSEENKEAPVPENRPVPRLNERILSSLSRRSVAAHPWHDLEIGPGAPNIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKDLPPHRLSEIRRFFEDYKKNENKEVAVNDFLPSTTAVEAIQYSMDLYAEYILHTLRR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0162 248 Hamap Inorganic pyrophosphatase [ppa]. 83 239 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele40g0162 248 PANTHER INORGANIC PYROPHOSPHATASE 31 248 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele40g0162 248 Pfam Inorganic pyrophosphatase 87 238 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele40g0162 248 Gene3D Inorganic pyrophosphatase 66 244 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele40g0162 248 SUPERFAMILY Inorganic pyrophosphatase 64 244 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele40g0162 248 CDD pyrophosphatase 83 236 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele40g0162 248 FunFam Soluble inorganic pyrophosphatase 4 66 244 - -
Lele40g0162 248 ProSitePatterns Inorganic pyrophosphatase signature. 134 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0162 Lele-ChrLele40 1246520 1251403 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0156 37 1267212 1271573 Lele40g0162 40 1246520 1251403 hybridization
Lele38g0167 38 1343030 1345749 Lele40g0162 40 1246520 1251403 hybridization