Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0156 ATGCATGGCAAATTTATTTTGTGCTCTTCCTGTCTTAAGATGAGCCATTCGGAGGAGAATAACGAAGCTCCAGTTCCAGAAAACCAACCAGAGAATCGACCAGTTCCTCGTTTGAATGAAAGGATTCTTTCATCTTTGTCTAGGAGATCAATTGCTGCTCACCCCTGGCACGATCTTGAAATTGGACCTGGAGCTCCCAATATCTTCAATTGTGTTGTGGAGATTACCAAGGGAAGCAAGGTGAAATATGAACTTGACAAGAAGACTGGATTGATTAAGGTTGACCGGGTCTTGTACTCATCTGTTGTTTATCCTCATAACTATGGCTTTATCCCTCGTACACTCTGTGAAGACAACGATCCGCTTGATGTCCTGATTATAATGCAGGAGCCAGTTCTTCCTGGTTGTTTCCTACGAGCCAAGGCCATTGGGTTGATGCCCATGATTGACCAGGGAGAGAAGGATGATAAGATTATCGCAGTATGTGCCGATGATCCAGAGTACAAGCACTACAATGACATCAAAGATCTTCCACCTCATCGTCTATCCGAGATTCGACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAAGAGGTTGCTGTTAATGACTTCTTGCCTTCAACCACTGCTGTTGAAGCCATCCAGTATTCAATGGATCTTTACGCGGAGTATATTCTGCACACCTTGAGGAGATAG 699 0.4378 MHGKFILCSSCLKMSHSEENNEAPVPENQPENRPVPRLNERILSSLSRRSIAAHPWHDLEIGPGAPNIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKDLPPHRLSEIRRFFEDYKKNENKEVAVNDFLPSTTAVEAIQYSMDLYAEYILHTLRR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0156 232 FunFam Soluble inorganic pyrophosphatase 4 50 228 - -
Lele37g0156 232 ProSitePatterns Inorganic pyrophosphatase signature. 118 124 - -
Lele37g0156 232 Gene3D Inorganic pyrophosphatase 50 228 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele37g0156 232 SUPERFAMILY Inorganic pyrophosphatase 48 228 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele37g0156 232 PANTHER INORGANIC PYROPHOSPHATASE 17 232 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele37g0156 232 Hamap Inorganic pyrophosphatase [ppa]. 67 223 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele37g0156 232 CDD pyrophosphatase 67 220 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele37g0156 232 Pfam Inorganic pyrophosphatase 71 222 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0156 Lele-ChrLele37 1267212 1271573 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0156 37 1267212 1271573 Lele39g1270 39 21220063 21224665 hybridization
Lele37g0156 37 1267212 1271573 Lele40g0162 40 1246520 1251403 hybridization