Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0167 ATGAGCCACTCAGATGAGAACAAAGAAGCATCAGTTCCAGAAAACCGACCAGAAAATCAACCAGTTCCTCGTTTAAATGAAAGGATTCTTTCATCTTTGTCAAGGAGATCAGTTGCTGCTCACCCCTGGCACGATCTTGAAATTGGACCTGGAGCTCCCAATATTTTCAATTGTGTTGTGGAGATTACAAAGGGAAGCAAGGTGAAATATGAACTTGACAAGAAGACTGGATTGATTAAGGTTGACCGTGTCTTGTACTCATCTGTTGTTTATCCTCATAACTATGGCTTTATCCCTCGTACACTGTGTGAAGACAATGATCCACTCGATGTCCTGATTATAATGCAGGAGCCAGTTCTTCCTGGTTGTTTCCTACGAGCCAAGGCCATTGGGTTGATGCCCATGATTGACCAGGGAGAGAAGGATGATAAGATTATTGCAGTATGTGCCGATGATCCAGAGTACAAGCACTATAATGACATCAAAGATCTTCCACCTCATCGTCTCTCTGAGATTCGACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTGGCTGTTAATGACTTCTTGCCTTCAACCGCTGCTGTTGAAGCCATCCAATATTCGATGGATCTTTACGCGGAGTATATTCTGCACACCTTGAGGAGATAG 660 0.4333 MSHSDENKEASVPENRPENQPVPRLNERILSSLSRRSVAAHPWHDLEIGPGAPNIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKDLPPHRLSEIRRFFEDYKKNENKEVAVNDFLPSTAAVEAIQYSMDLYAEYILHTLRR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0167 219 CDD pyrophosphatase 54 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele38g0167 219 Pfam Inorganic pyrophosphatase 58 209 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele38g0167 219 SUPERFAMILY Inorganic pyrophosphatase 35 215 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele38g0167 219 ProSitePatterns Inorganic pyrophosphatase signature. 105 111 - -
Lele38g0167 219 PANTHER INORGANIC PYROPHOSPHATASE 15 219 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele38g0167 219 MobiDBLite consensus disorder prediction 1 25 - -
Lele38g0167 219 Hamap Inorganic pyrophosphatase [ppa]. 54 210 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele38g0167 219 FunFam Soluble inorganic pyrophosphatase 4 37 215 - -
Lele38g0167 219 Gene3D Inorganic pyrophosphatase 37 215 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0167 Lele-ChrLele38 1343030 1345749 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0167 38 1343030 1345749 Lele39g1270 39 21220063 21224665 hybridization
Lele38g0167 38 1343030 1345749 Lele40g0162 40 1246520 1251403 hybridization