Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1270 ATGGACAAGAAAACATCGTCCTCGCCTCCTTTCCCTGTTCAGCCATTGACAATTTGTTCAGATTACTCTGAGTCTTCTAGGGAAGGTGCGTTTCTTTTTTCTTTGGTTCAGAACTTTATTTTGTGCTCTTCCTGTATTAAGATGAGTCATTCGGAGGAGAATAACGAAGCGCCAGTTCCAGAAAACCGACCAGAGAATCGACAAGTTCCTCGTTTGAATGAAAGGATTCTCTCATCTTTGTCTAGGAGATCAATTGCTGCTCACCCCTGGCACGATCTTGAAATTGGACCTGGAGCTCCCAATATCTTCAATTGTGTTGTGGAGATTACCAAGGGAAGCAAGGTGAAATATGAACTTGACAAGAAGACTGGATTGATTAAGGTTGACCGGGTCTTGTACTCATCTGTGGTTTATCCTCATAACTATGGCTTTATCCCTCGTACACTCTGTGAAGACAACGATCCGCTTGATGTCCTGATTATAATGCAGGAGCCAGTTCTTCCTGGTTGTTTCCTGCGAGCCAAGGCCATCGGGTTGATGCCCATGATTGATCAGGGAGAGAAGGATGATAAGATTATTGCAGTATGTGCCGATGATCCAGAGTACAAGCACTACAATGACATCAAAGATCTTCCACCTCATCGTCTCTCCGAGATTCGACGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAAGAGGTTGCTGTTAATGACTTCTTACCTTCAACCGCTGCTGTTGAAGCCATCCAGTATTCAATGGATCTTTACGCGGAGTATATTCTGCACACCTTGAGGAGATAG 801 0.4395 MDKKTSSSPPFPVQPLTICSDYSESSREGAFLFSLVQNFILCSSCIKMSHSEENNEAPVPENRPENRQVPRLNERILSSLSRRSIAAHPWHDLEIGPGAPNIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYNDIKDLPPHRLSEIRRFFEDYKKNENKEVAVNDFLPSTAAVEAIQYSMDLYAEYILHTLRR 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1270 266 Coils Coil 261 266 - -
Lele39g1270 266 ProSitePatterns Inorganic pyrophosphatase signature. 152 158 - -
Lele39g1270 266 Hamap Inorganic pyrophosphatase [ppa]. 101 257 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele39g1270 266 SUPERFAMILY Inorganic pyrophosphatase 82 262 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele39g1270 266 PANTHER INORGANIC PYROPHOSPHATASE 48 266 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele39g1270 266 FunFam Soluble inorganic pyrophosphatase 4 84 262 - -
Lele39g1270 266 Pfam Inorganic pyrophosphatase 105 256 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele39g1270 266 Gene3D Inorganic pyrophosphatase 84 262 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele39g1270 266 CDD pyrophosphatase 101 254 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1270 Lele-ChrLele39 21220063 21224665 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0156 37 1267212 1271573 Lele39g1270 39 21220063 21224665 hybridization
Lele38g0167 38 1343030 1345749 Lele39g1270 39 21220063 21224665 hybridization