Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1239 ATGTGGGACCACCGCCTTTCCTATGCTACCAGCTCAGCTAATTTTACTGAAGAGAGTGATTTAAGCAGTCCAAATTCAGATGACAAGGCGAGAACCATGGACGAAAAATTGAAAACTGGTATCTCCATGGCCATGACAGCAGGTTTCAGTAGTGCTGATTGTATTCTTACGGACCCAAAGCTTGGGAAAGCCCTGACATGGACTAAAGACACAGAACATGAGAAAGAGGGTCAAGCTAAGAAGCCTTCAAGACATGGGAGAGGCCTTAGCAGATCTCTCTCTGAGGGGCATTTTAATTCCTTGACCTGTTTGTCTGATACCCTTGATGCAAAATGGACGGGTGAAGAACCTTCAGGGTTTGACATCCCAAAGGTGACATTTCGGATCAAGCAATTGCCCAAAGGACATGTTACTATAGAAGACTCTTTAAGCTGGCTAGGAATGCCATTCATAAACTTCTATCAATCATTTAACAAGAACTTCCTTATCAGTGCCCAAAAGTTTGATACACTGGCCGACTACAACCCTGTTTACTTATCTTCCCTATCTTCCTTCCAGGAGATGGAACTCCAAGGGGAAAGAACAAAAGATGGAGGGGTTGAATCAATGCCTTCATTGTATAAAACAAAAGATGGAGGATTTGAAGCAATGTCTTCATTATGTTTATCTGACACTACAAATTTCCAGTCGTTCCTTTCTTCTGATGAAACAACTACTGATTCTAAGAAAAGCTTTCTCTCCACAGATGATACATTACCATCGTTATCTGCCTCTCGTAGCTCATGGGTGGGAGATCCACTGGGAGGAAAAGAATCAAAGATAGAAGTGCTGGTTATGGAGAATCTTCTTTTTAGGAGGAACGTGATACGGCTTTATGATCTCAAAGGATCTTCAAGGTCTCGCTATAATTCGGATTCTACTGGGACTAACAAGGTTCTGCTAGACCAGAACTTGATTGAATCAATACCAACTTCTCCCATTTTTGTGGGAAGTAAAGCAAAACGGTTGTTAGTTAGAGCTGTCTGGAATGATACTAATTTTCTTGCAGCGCTGGAGAAAAAGACCGTCATGTGCCTGTTCATCAGGACAGGGTTGTCTAGTCCCATCCTATGGAATATGCATGATAGAGAGAAGGATATTGTTGGAACCTTGGACGATGGGTTGGTGTTGGGATTCTGGAAAACGAGGCCATACATCGTATGCTTCACAAATAATGTCTCCACTTGTCTCATCTCTGTAGCAAACGACTCCCTCTGCTTAGAGACCTTGTTGAGGGAAGCTGAGATTCTGAGTAATGGAGGAGGTGGCTTCCTCAGAGGCAAGGAGACATGGAATCTCTGTTGTATTTCTGAATTAGGGTTTGAGATGAAGCACACTTCAGAGCCATAA 1389 0.4284 MWDHRLSYATSSANFTEESDLSSPNSDDKARTMDEKLKTGISMAMTAGFSSADCILTDPKLGKALTWTKDTEHEKEGQAKKPSRHGRGLSRSLSEGHFNSLTCLSDTLDAKWTGEEPSGFDIPKVTFRIKQLPKGHVTIEDSLSWLGMPFINFYQSFNKNFLISAQKFDTLADYNPVYLSSLSSFQEMELQGERTKDGGVESMPSLYKTKDGGFEAMSSLCLSDTTNFQSFLSSDETTTDSKKSFLSTDDTLPSLSASRSSWVGDPLGGKESKIEVLVMENLLFRRNVIRLYDLKGSSRSRYNSDSTGTNKVLLDQNLIESIPTSPIFVGSKAKRLLVRAVWNDTNFLAALEKKTVMCLFIRTGLSSPILWNMHDREKDIVGTLDDGLVLGFWKTRPYIVCFTNNVSTCLISVANDSLCLETLLREAEILSNGGGGFLRGKETWNLCCISELGFEMKHTSEP 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1239 462 Gene3D - 283 357 - -
Lele39g1239 462 MobiDBLite consensus disorder prediction 68 93 - -
Lele39g1239 462 SMART PIPK_2 181 411 IPR002498 GO:0016307|GO:0046488
Lele39g1239 462 SUPERFAMILY SAICAR synthase-like 270 351 - -
Lele39g1239 462 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 268 350 - -
Lele39g1239 462 MobiDBLite consensus disorder prediction 68 91 - -
Lele39g1239 462 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 271 351 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1239 Lele-ChrLele39 20973495 20977937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1239 268 352 Acyl Lipid Metabolism Gene Families AT4G33240 75.294 3.37e-36 140
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1239 39 20973495 20977937 Lele39g1239 39 20973495 20977937 ECH
Lele37g0184 37 1484444 1489060 Lele39g1239 39 20973495 20977937 hybridization
Lele38g0191 38 1525012 1527885 Lele39g1239 39 20973495 20977937 hybridization