Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0191 ATGTGGGACCACCGCCTTACCTATGCTACTAGCTCAGCTAATTTTACTGACGAGAGTGATTTAAGCAGTTCAAATTCAGATGACAAGGCGAGAAACATGGATGAAAAATTGAAAACTGGGATCTCCATGTCCATGACAGCAGGTTTCAGTAGTGCTGATTGTATTCTTACGGATCCAAAGCTTTTGGAAAGCCCTGACCTGGAAAGAGTAGGACGTGGTAGCAGAATTTCCCAAGCTGACGACATATTTGATCAAGAAATTGACATGACTAAAGACACTGAACATGAGAAAGAGGGTCAATCTAAGAAGCCTTCAAGACATGGGAGAGGCATTCGCAGATCTCTCTCTGAGGGGCATTTTAATTCCTTGACCTGTTTGTCTGATACCCTTGATGCAAAATGGACCGGGGAAGAACCTTCAGGGTGTGTGATCCCAAGGGTTAACGCTTCTGTAAATCTAGATAACTTTATGGCTGATTCTTTGAGCAGCGCTATACAAAGTGACATTTCGAATCAAGGGAATCATCATGCAGAAGACCAAAATGTCCTCAACAAATTTCCCAGAGGACATGATAATATAGAAGACTCTTTAAGCTGGCTAGGAATGTCATTCATAAACTTCTATCGATCATTTAACAAGAACTTCCTTGTCAGTGCCCAAAAGTTTGATACACTAGCTGACTACAACCCTGTTTACTTATCTTCCTTATCTTCCTTCCGGGAAATGGAACTCCAAGGTGAAGCAAGGCTGCTTCTTCCGATTGGTGTTAATGACACTGTAATACCAGTGTTTGATGATGAGCCCTCAAGTATCATATCGTATGCTTTAATGTCACCAGAATATCATGCCCAACTGATTGATGAAGGAGAAAGATCAAAAGATGGAGGGGTTGAATCAATGCCTTCATTGTATAGAACAAAAGATGGAGGATTTGAAACAATGTCTTCATCATGTTTATCTGACTCTGCAAATTTCCAGTCTTTCCTTTCTGCTGATGAAACAACTTCTGATTCTCAGAAAAGTTTTTTCTCCACAGATGATACGTTATCATCTTTTTCTGCCTCTCGTAGCTCATGGGTGGGAGATCCACTGGTTACAGTAAAGCATCCCAAGGGTGGGAAAGAATCAAAGATAGAGGTGCTGGTTATGGAGAATCTTCTGTTTAGGAGGAACGTGATACGACTTTATGATCTCAAAGGATCTTCCAGGTCTCGCTATAACTCTGATTCTCCTGGGACCAACAAGGTTCTGCTGGACCAGAACTTGATTGAATCAATACCAACTTCTCCCATTTTTGTGGGAAGTAAAGCAAAACGGTTGTTACTCAGAGCTGTCTGGAATGATACTAATTTTCTTGCAATTTCAAATGTAAGATCTTCATCATATTTGGGTTTAGATGTTGGTCTCATCATTTTGGCAACCGGCATGGGGCAATCTTCCTTCTTTATTCGCCAACCAAATTTTGAACATTTGGTCAAAAGTACTTAG 1488 0.4086 MWDHRLTYATSSANFTDESDLSSSNSDDKARNMDEKLKTGISMSMTAGFSSADCILTDPKLLESPDLERVGRGSRISQADDIFDQEIDMTKDTEHEKEGQSKKPSRHGRGIRRSLSEGHFNSLTCLSDTLDAKWTGEEPSGCVIPRVNASVNLDNFMADSLSSAIQSDISNQGNHHAEDQNVLNKFPRGHDNIEDSLSWLGMSFINFYRSFNKNFLVSAQKFDTLADYNPVYLSSLSSFREMELQGEARLLLPIGVNDTVIPVFDDEPSSIISYALMSPEYHAQLIDEGERSKDGGVESMPSLYRTKDGGFETMSSSCLSDSANFQSFLSADETTSDSQKSFFSTDDTLSSFSASRSSWVGDPLVTVKHPKGGKESKIEVLVMENLLFRRNVIRLYDLKGSSRSRYNSDSPGTNKVLLDQNLIESIPTSPIFVGSKAKRLLLRAVWNDTNFLAISNVRSSSYLGLDVGLIILATGMGQSSFFIRQPNFEHLVKST 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0191 495 SMART PIPK_2 280 481 IPR002498 GO:0016307|GO:0046488
Lele38g0191 495 SUPERFAMILY SAICAR synthase-like 374 457 - -
Lele38g0191 495 MobiDBLite consensus disorder prediction 85 113 - -
Lele38g0191 495 Gene3D - 387 471 - -
Lele38g0191 495 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 2 354 - -
Lele38g0191 495 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 370 457 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0191 Lele-ChrLele38 1525012 1527885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0191 365 466 EF-hand Containing Proteins AT3G14270 70.874 1.70e-37 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0191 38 1525012 1527885 Lele38g0191 38 1525012 1527885 ECH
Lele38g0191 38 1525012 1527885 Lele39g1239 39 20973495 20977937 hybridization
Lele38g0191 38 1525012 1527885 Lele40g0184 40 1445292 1445945 hybridization