Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0184 ATGGATGCTCAACGAAAGACTTTATCTGAAGTTGTAAGCATCGTCAAGTCATGGATTCCTTGGCCACATCAATCTGAGCAGGCAAATGTGTCCAGGATTTATTGGATGCCTGACAAGATCTGTACAGTATGCTACGGGTGTGATTCCCCATTTACCTTATTTAATCGTAGGCACCATTGTCGTCACTGTGGCAAAATTTTCTGTGCCCGCTGCACTACAAACTCAGTTCCTGCTCCATCTAGCTACCAGAGGGACGGGGTTCGGGTATGCGATTTTTGTTACAAGCAATGGGAGCAGGACTTAGCTAATTGTAATAACGATAATCAGGTCCCCAATTTGGATCATAGTTCTTCACTATCAGTTTCAAGCTTTACCAGTGCTAAATCCATTGTCACGGCTAATAGTAGTAGCAATACTATTTGCTCCCTTCCTGTTTCGATTGGTTGTTGTCAACACCAGCAACAATCTTCTGATATGAGCCTACATCGATCATCCGTGAAAGTAAAAGGCCTTGATAGGGAAATTTTATCAGCACTTAGAAGAGATCTTGCGGCAAGCCTAGGGGATTCATCGTTAAATCCATGCGAATACTCAATGGAAAGTGGCTACTATAGTCAAGCTGATTTTGATGGAGTTCATAACATTGATGGATCACAGGTGGTTAACCGGGCCGAGCTTTTATTTTCGGAGGTACTGAATGCTCTTAGTCAGATTGAAGATAAAAGAACTAGCTCAACTTCAGTTAATAGTGGACTTGTAACACCCGAATCTGGGAACCAAGTTACTGAACTGGAGGGCATATTGCAAAGGGAGAAAGATGAATTTGAGGTGAGGCCTTTAGTTCTAAATGCTTGA 855 0.4246 MDAQRKTLSEVVSIVKSWIPWPHQSEQANVSRIYWMPDKICTVCYGCDSPFTLFNRRHHCRHCGKIFCARCTTNSVPAPSSYQRDGVRVCDFCYKQWEQDLANCNNDNQVPNLDHSSSLSVSSFTSAKSIVTANSSSNTICSLPVSIGCCQHQQQSSDMSLHRSSVKVKGLDREILSALRRDLAASLGDSSLNPCEYSMESGYYSQADFDGVHNIDGSQVVNRAELLFSEVLNALSQIEDKRTSSTSVNSGLVTPESGNQVTELEGILQREKDEFEVRPLVLNA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0184 284 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 38 98 IPR017455 -
Lele37g0184 284 SMART fyve_4 30 99 IPR000306 GO:0046872
Lele37g0184 284 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 10 142 - -
Lele37g0184 284 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 26 105 - -
Lele37g0184 284 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 103 IPR013083 -
Lele37g0184 284 SUPERFAMILY FYVE/PHD zinc finger 34 100 IPR011011 -
Lele37g0184 284 Pfam FYVE zinc finger 34 98 IPR000306 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0184 Lele-ChrLele37 1484444 1489060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0184 147 276 EF-hand Containing Proteins AT3G14270 31.818 4.61e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0184 37 1484444 1489060 Lele37g0184 37 1484444 1489060 ECH
Lele37g0184 37 1484444 1489060 Lele39g1239 39 20973495 20977937 hybridization
Lele37g0184 37 1484444 1489060 Lele40g0184 40 1445292 1445945 hybridization