Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1225 ATGGAGTTACCGAAGGAGAAGCAGCGTTCTATTAATGATGGCTGTAGTTCCTGCATCATGCAGAAGTTCAGGCTCTATGAAACTCGCTCGAAATTTTATATGATTGGTAGAGACAAGAGCAGAACCTCTTGGAGGGTCTTAAAGATTGATAGATTGGAGACAGCTGAACTAAATATCACTGAGGATTCGATGATATACTCAGAAATTGAGTGTTGTGATATTTTAAGACGGATACATGAAGGAAACAGGTCAACTGGGGGACTTAAATTTGTTACAACTTGCTATGGAATCATTGGATTCATCAAATTTCTTGAGCCATATTACATGTTGCTCATAACAAATCGAAGAAAGATTGGCACAATTTGTGGGCATGCAATATATACCATTACAAAGAGTGAAATGATTCCGGTTCCACATCCTGCTGTGCGATCCAAAATGGCATATTCTAAAGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTAGGAAGGACTTCTTTTTCAGCTACTCATACCATGTCATGCGAAGTCTTCAAAAGAACTTATCTGATAATAGTACAGCAGAGCACAAACTTTATGAAACAATGTTTGTTTGGAATGAGTTCTTAACTCGTGAAATCAGGAATAACCTTCAGAATACTTCCTGGACAGTTGCTTTAGTGCATGGCTTTTTTAAACAGGTTAAACTCTCTGTATTTGAGAGGGAGTTCTACTTAACTATCATTTCTAGACGCTCGTGTCATTATGCTGGCACCAGATATTTGAAACGAGGAGTGAATGAAAAGGGCAGAGTGGCTAATGATGTTGAGACAGAGCAAATAGTCTTTGAAGATGGTCAAGATGGATGCCCCATGCAAATAAGTTCTGTGGTACAGATGCGGGGATCAATTCCTCTTTTCTGGTCTCAAGAAGCCTCTCCATTGAATATGAAGCCTGACATTATATTATCAAAGGAGGACCATAACTTTGAAGCCACAAGACTTCATTTTGAAAACCTTGTCAAGAGATATGGAAACCCCATTATTATATTGAACTTGATTAAGACGCGTGAGAAGAAGCCTCGAGAAACTATACTCCGAGCTGAGTTTGCAAATGCTGTCAGGTCCATTAATAAAACTATGAGAGGGGAAAATCGCCTCAGGTTCCTTCACTGGGATCTGAATCGGCACTCAAAATGCAAAGCGACTAATGTGTTGACACAACTGGGAAAAGTTGCTGCTTTTGCTTTAAAATTAACGGGCATCTTCTACTGTCAAGTGACACCAAATGTAAGGCCTGAGGGATTATTGCAAAATTCATTCTCTGAGAATAATATCCATGATCTCTATGCCACTCAACAGGCTTGTATTAATGAGGATACTCCTAATAAGGAAACTAAAATTAATAGATGTTATTTCAATGATGATGTGATTGGAGATTACTGTGTCAAAGCCTGGACGCTTCAATCAGGGGTTTTGAGGACCAATTGCATAGACTGTTTAGATCGTACTAATGTCGCCCAATATGCTTATGGATTAACTGCTCTTGGACGTCAGCTACAAGCTTTAAGATATTTGGAATCCCCATATATTGATTTTGACAACCCTTTGGCAACGGAGTTAATGGCTGTCTATGAGTTGATGGGTGACACATTAGCATTGCAATATGGGGGTTCTGCCGCACACAATAAGATATTTTCTGAGAGAAGAGGTCAATGGAAGGCAGCGATGCAATCCCAGGAATTTATCAGAACTCTGCAGCGCTATTACAATAATACATACTTGGATGGTGATAAACAAAATGCAATCAACATATTTTTGGGGCATTTTCAGCCGCAACAGGGAAAACCAGCGTTATGGGAGCTAGATTCAGATCAGTCTTACAATGTTGCCAAGCATGGGTTAGTTTTAGCTGATGATAATATTAGGTCAACTATCAAAAGATCGCTATCAGATGGCAATATTGTTTGTGAGAGTGACTCAAGTAGGAACATGGATGATACTAACAGTCAGCATTTATCTGAAAAGGCTGATGACCAATGTCTTTCAGAGTCTGATCCAGATGTCTTTACTTGTGGAAGTGATATTTGTCAATACAGGCAGATGCAAAGGGGAGTACTTGAGGGCCGATGTTATGAAAGTGATCACATTTGTTATGATGAACATGGGGATGCGTGTGACTGCTCAAATTTTCTTGATGTGGACTGGCTTTCATCTTCTGGAAATTCTTGTGAAGAGGAATTACTTGAGAGGAAACTTATGGTATCCGAACTTAAATTGGATTACTCTAGCAGGTCAACCAGCATCTCATCAGAGAACATTGCAAATGAACTAAGAACTGAGGCTAGTACATCTGCAAATGAAACTGGACCCAGCATGAAGGCGAGGAAGCAGAGTGCCCCAGAGCTCAACAAAGATGGTGGTTATGCTGAACGCTTTTCGCGCTGGGTAACTCATGGAGAGATGCTTTATGTCTAG 2463 0.3999 MELPKEKQRSINDGCSSCIMQKFRLYETRSKFYMIGRDKSRTSWRVLKIDRLETAELNITEDSMIYSEIECCDILRRIHEGNRSTGGLKFVTTCYGIIGFIKFLEPYYMLLITNRRKIGTICGHAIYTITKSEMIPVPHPAVRSKMAYSKDENRYKKLLCSVDLRKDFFFSYSYHVMRSLQKNLSDNSTAEHKLYETMFVWNEFLTREIRNNLQNTSWTVALVHGFFKQVKLSVFEREFYLTIISRRSCHYAGTRYLKRGVNEKGRVANDVETEQIVFEDGQDGCPMQISSVVQMRGSIPLFWSQEASPLNMKPDIILSKEDHNFEATRLHFENLVKRYGNPIIILNLIKTREKKPRETILRAEFANAVRSINKTMRGENRLRFLHWDLNRHSKCKATNVLTQLGKVAAFALKLTGIFYCQVTPNVRPEGLLQNSFSENNIHDLYATQQACINEDTPNKETKINRCYFNDDVIGDYCVKAWTLQSGVLRTNCIDCLDRTNVAQYAYGLTALGRQLQALRYLESPYIDFDNPLATELMAVYELMGDTLALQYGGSAAHNKIFSERRGQWKAAMQSQEFIRTLQRYYNNTYLDGDKQNAINIFLGHFQPQQGKPALWELDSDQSYNVAKHGLVLADDNIRSTIKRSLSDGNIVCESDSSRNMDDTNSQHLSEKADDQCLSESDPDVFTCGSDICQYRQMQRGVLEGRCYESDHICYDEHGDACDCSNFLDVDWLSSSGNSCEEELLERKLMVSELKLDYSSRSTSISSENIANELRTEASTSANETGPSMKARKQSAPELNKDGGYAERFSRWVTHGEMLYV 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1225 820 MobiDBLite consensus disorder prediction 664 678 - -
Lele39g1225 820 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 12 784 IPR043573 GO:0043813|GO:0046856
Lele39g1225 820 ProSiteProfiles Sac phosphatase domain profile. 159 553 IPR002013 GO:0016791
Lele39g1225 820 MobiDBLite consensus disorder prediction 653 678 - -
Lele39g1225 820 Pfam SacI homology domain 95 394 IPR002013 GO:0016791
Lele39g1225 820 MobiDBLite consensus disorder prediction 772 799 - -
Lele39g1225 820 MobiDBLite consensus disorder prediction 772 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1225 Lele-ChrLele39 20882988 20891492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1225 14 818 Acyl Lipid Metabolism Gene Families AT5G20840 54.843 0.0 838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1225 39 20882988 20891492 Lele39g1225 39 20882988 20891492 ECH
Lele37g0198 37 1573386 1581329 Lele39g1225 39 20882988 20891492 hybridization
Lele38g0199 38 1575846 1583845 Lele39g1225 39 20882988 20891492 hybridization