Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1206 ATGTCCTGGGCAGGCCCTGAGGATGTTTACCTTTCCACTTCACTCGCTAGTTATCTTGACAAGAAACTTCTTGTATTGCTGAGAGATGGTAGAAAGCTAATGGGAACACTTCGCTCTTTCGATCAATTTGCTAATGCTGTTCTTGAGGGTGCCTGTGAGAGGGTTATTGTTGGTGACCTGTATTGCGATATCCCTTTGGGTCTCTATGTAATCCGCGGGGAGAATGTTGTTTTGATTGGTGAGCTGGACTTGGAAAAAGAGGAACTTCCCCCACACATGACACGTGTTGCAACTGCAGAAATTAGAAGGGCACAGAAAGCAGAAAGGGAGGCTACAGATCTGAAGGGAACAATGAGGAGGAGGATGGAGTTCCTGGACTTGGACTAG 387 0.4677 MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVATAEIRRAQKAEREATDLKGTMRRRMEFLDLD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1206 128 FunFam U6 snRNA-associated Sm-like protein LSm1 12 125 - -
Lele39g1206 128 PANTHER LSM1 8 122 IPR044642 -
Lele39g1206 128 CDD LSm1 12 82 IPR034104 GO:0000956
Lele39g1206 128 Pfam LSM domain 14 80 IPR001163 -
Lele39g1206 128 SUPERFAMILY Sm-like ribonucleoproteins 13 85 IPR010920 -
Lele39g1206 128 Gene3D - 12 125 - -
Lele39g1206 128 SMART Sm3 13 81 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1206 Lele-ChrLele39 20759597 20761588 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0219 37 1697022 1699027 Lele39g1206 39 20759597 20761588 hybridization
Lele38g0221 38 1725533 1734384 Lele39g1206 39 20759597 20761588 hybridization