Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0219 ATGTCCTGGGCAGGCCCTGAGGATGTTTACCTTTCCACTTCACTCGCTAGTTATCTTGACATTGTTGTAGAGAAACTTCTTGTATTGCTGAGAGATGGTAGAAAGCTAATGGGAACACTTCGCTCTTTTGATCAATTTGCAAATGCTGTTCTTGAGGGTGCCTGTGAGAGGGTTATTGTTGGTGGCCTGTATTGCGATATCCCTTTGGGTCTCTATGTAATCCGCGGGGAGAATGTTGTTTTGATTGGTGAGCTGAGTGGATTTATACTATCTAAATATGATGGAAAGGCGCAGAAAGCAGAAAGGGAGGCTACAGATCTGAAGGGAACAATGAGGAGGAGGATGGAGTTCCTGGACTTGGACTAG 366 0.4508 MSWAGPEDVYLSTSLASYLDIVVEKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGGLYCDIPLGLYVIRGENVVLIGELSGFILSKYDGKAQKAEREATDLKGTMRRRMEFLDLD 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0219 121 SUPERFAMILY Sm-like ribonucleoproteins 24 88 IPR010920 -
Lele37g0219 121 Coils Coil 90 110 - -
Lele37g0219 121 Gene3D - 15 117 - -
Lele37g0219 121 Pfam LSM domain 24 83 IPR001163 -
Lele37g0219 121 PANTHER LSM1 8 114 IPR044642 -
Lele37g0219 121 SMART Sm3 13 84 IPR001163 -
Lele37g0219 121 CDD LSm1 12 85 IPR034104 GO:0000956
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0219 Lele-ChrLele37 1697022 1699027 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0219 37 1697022 1699027 Lele39g1206 39 20759597 20761588 hybridization
Lele37g0219 37 1697022 1699027 Lele40g0208 40 1610382 1612567 hybridization