Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1133 ATGGGGTCTAATTTTTCTTGTTGTGGTCTGAAACGCGTGGTTGGATCTTTTCTAGATCTGTTACTGGTTAGTTATCATTTTCTAAGTATGACCCCTCGGCAACTTCTTGTGAGGGACGTAGTGATTAGAGAACAGGGCCTATGTCCATCGGTAAAGAGCATCCTTCTTCTAGATTCTGAAGGGAAGCGTGTAGCAGTCAAGTACTATTCTGATGATTGGCCAACAAACAATGCAAAATTAGCTTTTGAGAAGTTAGTATTCAATAAGACTGTGAAGACAAATGCTCGGACAGAAGCTGAGGTAACACTAATTGAGAATAATGTCGTTATATACAAGTTTGTTCAAGACTTGCATTTCTTTGTCACTGGTGGTGATGATGAAAACGAGCTCATTTTGGCTTCAGTTCTTCAGGGTTTCTTTGATGCAGTCACCTATTTGTTGAGGAGCAATGTTGACAAAAGGGAGGCACTTGAGAACTTGGATCTCATTCTTTTATGCCTAGATGAGATTGTTGATGGAGGGATGATACTTGAAACAAATGGATCCCTTATTGCCGAAAAGGTTACCTCTCATAGTATTGATGCTGACGCCCCCTTATCTGAGCAGACATTAACTCAAGCATGGGTTACAGCTAGAGAACATTTGACAAGAACCCTCCTGAAATGA 666 0.4069 MGSNFSCCGLKRVVGSFLDLLLVSYHFLSMTPRQLLVRDVVIREQGLCPSVKSILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKLVFNKTVKTNARTEAEVTLIENNVVIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTYLLRSNVDKREALENLDLILLCLDEIVDGGMILETNGSLIAEKVTSHSIDADAPLSEQTLTQAWVTAREHLTRTLLK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1133 221 Gene3D - 45 191 - -
Lele39g1133 221 CDD Zeta-COP 52 187 - -
Lele39g1133 221 FunFam Coatomer subunit zeta-2 45 191 - -
Lele39g1133 221 Pfam Clathrin adaptor complex small chain 51 190 IPR022775 -
Lele39g1133 221 PANTHER ZETA-COAT PROTEIN 47 220 IPR039652 GO:0006890|GO:0030126
Lele39g1133 221 SUPERFAMILY SNARE-like 51 192 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1133 Lele-ChrLele39 19821566 19823644 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0291 37 2464879 2466970 Lele39g1133 39 19821566 19823644 hybridization
Lele38g0275 38 2192302 2195216 Lele39g1133 39 19821566 19823644 hybridization