Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0291 ATGGCGTCTAATGGCTTATGTCCATCGGTAAAGAACATTCTTCTTCTAGATTCTGAAGGGAAGCGTGTAGCTGTCAAGTACTTTTCTGATGACTGGCCAACAAACAATGCAAAATTAGCTTTTGAGAAGTTAGTATTCAATAAGACTGTGAAGACAAATGCTCGGACAGAAGCTGAGGTAACACTAATTGAGAATAATGTCGTTATATACAAGTTTGTTCAAGACTTGCATTTCTTTGTCACTGGTGGTGATGATGAAAACGAGCTCATTTTGGCTTCAGTTCTTCAGGGTTTCTTTGATGCAGTCACCTATTTGTTGAGGAGCAATGTTGACAAAAGGGAGGCACTTGAGAACTTGGATCTCATTCTTTTATGCCTAGATGAGATTGTTGATGGCGGGATGATACTTGAAACAAATGGATCCCTTATTGCCGAAAAGGTTACCTCTCATAGCATTGATGCTGACGCCCCCTTATCTGAGCAGACATTAACTCAAGCATGGGCTACAGCTAGAGAACATTTGACAAGAACCCTCCTGAAATGA 543 0.407 MASNGLCPSVKNILLLDSEGKRVAVKYFSDDWPTNNAKLAFEKLVFNKTVKTNARTEAEVTLIENNVVIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTYLLRSNVDKREALENLDLILLCLDEIVDGGMILETNGSLIAEKVTSHSIDADAPLSEQTLTQAWATAREHLTRTLLK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0291 180 FunFam Coatomer subunit zeta-2 4 150 - -
Lele37g0291 180 PANTHER ZETA-COAT PROTEIN 6 179 IPR039652 GO:0006890|GO:0030126
Lele37g0291 180 Gene3D - 2 150 - -
Lele37g0291 180 SUPERFAMILY SNARE-like 10 151 IPR011012 -
Lele37g0291 180 Pfam Clathrin adaptor complex small chain 10 149 IPR022775 -
Lele37g0291 180 CDD Zeta-COP 11 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0291 Lele-ChrLele37 2464879 2466970 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0291 37 2464879 2466970 Lele39g1133 39 19821566 19823644 hybridization
Lele37g0291 37 2464879 2466970 Lele40g0261 40 2086630 2088732 hybridization