Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0275 ATGGTTTTGGAAGGAAACTATCCTCAATTCCGCCAGATCCCAGATCTGCGAAGTCCAAGCTTCTGTGACTCCTCTCTCCTCTTCTCTGCAATGGCGTCTAATGGCTTATGTCCATCGGTAAAGAACATTCTTCTTCTAGATTCTGAAGGGAAGCGTGTAGCAGTCAAGTACTATTCTGATGACTGGCCAACAAACAATGCAAAGTTAGCTTTTGAAAAGTTAGTATACAATAAGACTGCGAAGACAAATGCTCGGACAGAAGCTGAGGTAACACTAATTGAGAATAATGTTGTTATATACAAGTTTGTACAAGACTTGCATTTCTTTGTCACGGGTGATGATGATGAAAACGAGCTCATTTTGGCTTCAGTTCTTCAGGGTTTCTTTGATGCAGTCACCTATTTGTTGAGGAGCAATGTTGACAAAAGGGAGGCACTTGAGAACTTGGATCTCATTCTTTTATGCCTAGATGAGATTGTTGATGGAGGGTTGATACTTGAAACAAATGGATCCCTTATTGCTGAAAAGGTGACCTCTCATAGCATTGATGCTGACGCCCCCTTATCTGAGCAGACATTAACTCAAGCGTGGGCCACAGCTAGAGAACATTTGACAAGAACCCTTCTGAAATGA 633 0.4186 MVLEGNYPQFRQIPDLRSPSFCDSSLLFSAMASNGLCPSVKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKLVYNKTAKTNARTEAEVTLIENNVVIYKFVQDLHFFVTGDDDENELILASVLQGFFDAVTYLLRSNVDKREALENLDLILLCLDEIVDGGLILETNGSLIAEKVTSHSIDADAPLSEQTLTQAWATAREHLTRTLLK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0275 210 PANTHER ZETA-COAT PROTEIN 36 209 IPR039652 GO:0006890|GO:0030126
Lele38g0275 210 SUPERFAMILY SNARE-like 40 181 IPR011012 -
Lele38g0275 210 Gene3D - 32 180 - -
Lele38g0275 210 Pfam Clathrin adaptor complex small chain 40 179 IPR022775 -
Lele38g0275 210 CDD Zeta-COP 41 176 - -
Lele38g0275 210 FunFam Coatomer subunit zeta-2 34 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0275 Lele-ChrLele38 2192302 2195216 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0275 38 2192302 2195216 Lele39g1133 39 19821566 19823644 hybridization
Lele38g0275 38 2192302 2195216 Lele40g0261 40 2086630 2088732 hybridization