Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0969 ATGGCTCTCTTAGCTTTCTGGTTATTGGAGACTGGGGAAGGAAAGGAGAATCCAATCAATCTCAAGTTGCTGCTCAGGGGAGATGCTTTAGCTCAATTGAATCCAATTCTGAATAAAATAGATCAAAGATGGATTTGCCAAAGATCATTTATTGTTGACACTGAAATTGCCGAGTTCTTCTTCGTCGATACAACTCCATTTGTGGACAATTATTTTTTCAACCCAAAGGGATATACATATGATTGGAGAGGTGTGCTACCCAGAAAGAAATATTTGTCAAACCTCCTCAAGGATCTGGAAATGGAACTGAAGCTTTCAACAGCGAAATGGAAGATTGTTTTTGGGCACCACACAATCAGAAGCGTAGGATTCCATGGCGACACTCAAGAGTTTGTAAAACAGCTTCTTCCAATCCTTGAGCTTCACGTTAAAATTTCGGCACACAATGTAGACATGTACATCAATGGGCATGACCATTGTCTGGAACACATAAGCAGCACTACCAGCAAAATGCAGTTCTTAACGAGTGGAGGAGGATCAAAGTCATGGAGAGGAGACTTTGATTTGAATAGAGAAGAAGGTGTGAAGTTCTACTATGATGGTCAGGGCTTTATGTCTGTGGAGCTTCTAGAATCAGATGCCAGAATTGTATATTATGATATATTTGGTCAGTTCAAGCTTCAGCGTCAAATTCCTGCCTACGATCTCAGCACTCAGATTATTGAGAAGAATATGATGAGTTTCCTAAAAGTTTCTCAGATTCCTGTTATAGACTTGATGGATGAAAACTTGAAACCTGATACTGAGATATGGTTTTCAGCTAGCCAACTCATGCGAATTGCACTAGAGGGTAATGGTTGTTTTTATGCAACGAGTAATAAGGCTTCTACAGAGCTTCACAACTCAGTTCTTGCTCTAATGGAAGAGTTGTTTAATCTTCCACTTGAAACCAAAAAGAAAATCACCAGCGATAAGCCTAGGCATATTTACTTTGTACCAACTCCTAAAACTCCTTCATACGAAGCCATTGGAATTGACTTGGATGGCCCCTCGATCGGGGAAGCAATTCAAACGACATACTTCACCATATTACAACAGAATAACGTGGCAGTTTTGGAAGTTAAACTCAAAACTGGTGAATGGGTCGATATTGATCCCTCACCTTGTATGTTTCTAATTCAAGCAGGCGATGCATTAAAGATAGTTAAAGTTCAAGAAGAGCTAGTTGATGAAGACCATCCACTAATGTATAGAGCATTTGACCACTATGAATACATAGCCTTGCCTAGCAAGCTTCAGTCACAGACAGAAATTCCAAATTTTATTCTACTTAGAGTCTTGATGATGGCTATGGATGCTATTAATGAAAGAAACTTCTGTTGA 1383 0.3941 MALLAFWLLETGEGKENPINLKLLLRGDALAQLNPILNKIDQRWICQRSFIVDTEIAEFFFVDTTPFVDNYFFNPKGYTYDWRGVLPRKKYLSNLLKDLEMELKLSTAKWKIVFGHHTIRSVGFHGDTQEFVKQLLPILELHVKISAHNVDMYINGHDHCLEHISSTTSKMQFLTSGGGSKSWRGDFDLNREEGVKFYYDGQGFMSVELLESDARIVYYDIFGQFKLQRQIPAYDLSTQIIEKNMMSFLKVSQIPVIDLMDENLKPDTEIWFSASQLMRIALEGNGCFYATSNKASTELHNSVLALMEELFNLPLETKKKITSDKPRHIYFVPTPKTPSYEAIGIDLDGPSIGEAIQTTYFTILQQNNVAVLEVKLKTGEWVDIDPSPCMFLIQAGDALKIVKVQEELVDEDHPLMYRAFDHYEYIALPSKLQSQTEIPNFILLRVLMMAMDAINERNFC 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0969 460 Gene3D - 25 235 IPR029052 -
Lele39g0969 460 Pfam non-haem dioxygenase in morphine synthesis N-terminal 254 326 IPR026992 -
Lele39g0969 460 Gene3D - 236 344 IPR027443 -
Lele39g0969 460 SUPERFAMILY Clavaminate synthase-like 233 427 - -
Lele39g0969 460 SUPERFAMILY Metallo-dependent phosphatases 37 224 IPR029052 -
Lele39g0969 460 Gene3D - 352 403 IPR027443 -
Lele39g0969 460 PANTHER TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 26 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0969 Lele-ChrLele39 18536558 18541202 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0969 39 18536558 18541202 Lele39g0969 39 18536558 18541202 ECH
Lele37g0453 37 3735936 3737959 Lele39g0969 39 18536558 18541202 hybridization
Lele38g0423 38 3425779 3426919 Lele39g0969 39 18536558 18541202 hybridization