Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0423 ATGGCTTCCATAACGGTTTCCCAGATTCCCATTATCGACTTCACTGATGAAAACTTGAAGCCTTGTACAGAGACATGGTTTTCAGTTAGCCAAGTCGTGCGAAGTGCATTAGAGGGTAATGGTTGTTTTTTTGTAATGAATAATAAGGTCCCTATGGAGCTTTGCAATTCAGTGTTTGGTCTACTCAAAGAACTGTTCGATCTTCCACTGGAGACAAAAATGCAAAAGATTAGCGATAAGCCTAGCCAAGGTTACATTGGACGAAATCCAAAAGTCCCTTTATACGAAAGCATTGGAATCGATTTGAACGGCTCCTCGAACGAGGAAGCAATTCAAAAGTTCGCCAACATTATGTGGCCGACAGGATATGATCATTTCTGGTACTCCTTAAAACTCATTTATGTTGTTGTTTTTTTTCCCGATTATGTTCCCAGTAATGCATTTGTTTTTCTGCTATCGTTAATACTTTTATTTCGTTGTTTGAGTAGTGAGACAACCAATCTCTATGCCAAGTTGTTGTTAGAAATTGACCAAACCGCTAAAAGATTACTCTTTGATGCTTATGGTTTGGAAAAAATAAGCTGTGATTCTCTGCTTGAATCAACCAATTATACATTTCGGAGCTTCAAATACCGAGCACCCCAGAAGACAGAGAGTAATTTAGGATTGATTGCTCACACCGACAGTTCATACTTCACCGTATTACATCAGAATAATGTGGCAGGTTTGCAAGTTAAACTGAAAACTGGTGAATGGGTTAATATTGATCCCTCACCCTGTAAGTTTCTATTCCTAGCAGGGGATGCATTAAAGGTTTGGAGTAATGACAGAATACCAGCTTGTAAGCATAAAGTGATCATGAGGGAAGGGAAAGAGAGGTACTCCATGGGATTACTTTCATTTAACAGTAAGAAGGTTCAAACACAAGAAGAGCTGGTTGATGAAGACCATCCAATACGATATAGAGTATTTGACCATTATGAATACCAAGCCTTGCGTAACAAGTTTCCATCGCAGACGGAAATTTCAAATCTTATTCTACTTTGA 1047 0.3868 MASITVSQIPIIDFTDENLKPCTETWFSVSQVVRSALEGNGCFFVMNNKVPMELCNSVFGLLKELFDLPLETKMQKISDKPSQGYIGRNPKVPLYESIGIDLNGSSNEEAIQKFANIMWPTGYDHFWYSLKLIYVVVFFPDYVPSNAFVFLLSLILLFRCLSSETTNLYAKLLLEIDQTAKRLLFDAYGLEKISCDSLLESTNYTFRSFKYRAPQKTESNLGLIAHTDSSYFTVLHQNNVAGLQVKLKTGEWVNIDPSPCKFLFLAGDALKVWSNDRIPACKHKVIMREGKERYSMGLLSFNSKKVQTQEELVDEDHPIRYRVFDHYEYQALRNKFPSQTEISNLILL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0423 348 Pfam 2OG-Fe(II) oxygenase superfamily 211 298 IPR044861 -
Lele38g0423 348 Gene3D - 2 336 IPR027443 -
Lele38g0423 348 SUPERFAMILY Clavaminate synthase-like 4 334 - -
Lele38g0423 348 PRINTS Isopenicillin N synthase signature 33 50 - -
Lele38g0423 348 PRINTS Isopenicillin N synthase signature 262 288 - -
Lele38g0423 348 PRINTS Isopenicillin N synthase signature 226 247 - -
Lele38g0423 348 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 201 303 IPR005123 -
Lele38g0423 348 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Lele38g0423 348 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0423 Lele-ChrLele38 3425779 3426919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0423 169 329 Glycosyltransferase AT5G59530 30.233 2.12e-13 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0423 38 3425779 3426919 Lele38g0423 38 3425779 3426919 ECH
Lele38g0423 38 3425779 3426919 Lele39g0969 39 18536558 18541202 hybridization
Lele38g0423 38 3425779 3426919 Lele40g0400 40 3260151 3261287 hybridization