Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0453 ATGGGTTCAGAAACCACTCTTAAGCTTCCAGTCATTGACTTTAACAGCATTGACTTGGAAGGAAAAAGCCCTAAGTGGAAGGAAGTGACATCCCAAGTCATCAAAGCACTTGAGGAGTATGGTTGCTTTGAGGCTTTGTTCGATAAGGTTCCTTTAGAACTTCGCAGATCCTTATTTGCTTTGCTCAAAGAGACATTTGATCTCCCCCTTGAAACCAAACAACGAAATGTATATGATAACCCTTTTTATGGTTATATTGGAAAGGGACATAGAAGTCCACTCTACGAGAGCATTGGCATCGATGATTCACTTGTCCTTGAGAAAGTGAAGAGCTTGGAAACCAACTTGTGGCCTCAAGGATACCCAACTTTCAGCAAAGTTTTGAAAGACTTCTCAGAGCAGGTATCAGAGTTGGACCAGATGGTGAGGAAGATGGTTCTAGAAATTTTAGGGGTTGACAAGTACTTGGATGAGCACATGAACTCAAGCACTTATATGTTGAGGGTTATGAAATACTCGGCTCCTGAAACTGAAGAGGCAAAGTTGGGTGTAATCGAACACACAGATGCTGGCATAACGACCATACTGTATCAAATTAATGAAGTTGAGGGTTTAGAGATTGAAACCAAAGATGGAAAATGGATCACTTACCAGCCTTCACCTCATAGTTTTGTAGTTTTCGTCGGCGACTGTCTCCATGCATGGACAAATGGAAGGCTGTATAATGCATTTCACAAAGTAACGATGAGAGGAAATGAGGCAAGATACTCAGCAGCTCTGTTCGCAAGGCCCAAAGAAGGTTACATAATAAAAGCACCACAAGAGCTGGTTGATGAAGAGCACCCTCTTCTGTATAAGCCCTTTGATTTTGTTAAGTTCGTCGGCTATTTCCACACTGAAGAGGCCCAGAAACACAGAATTCCTCTTAAGGCTTATTGTGGTGTTTGA 948 0.4198 MGSETTLKLPVIDFNSIDLEGKSPKWKEVTSQVIKALEEYGCFEALFDKVPLELRRSLFALLKETFDLPLETKQRNVYDNPFYGYIGKGHRSPLYESIGIDDSLVLEKVKSLETNLWPQGYPTFSKVLKDFSEQVSELDQMVRKMVLEILGVDKYLDEHMNSSTYMLRVMKYSAPETEEAKLGVIEHTDAGITTILYQINEVEGLEIETKDGKWITYQPSPHSFVVFVGDCLHAWTNGRLYNAFHKVTMRGNEARYSAALFARPKEGYIIKAPQELVDEEHPLLYKPFDFVKFVGYFHTEEAQKHRIPLKAYCGV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0453 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 264 IPR005123 -
Lele37g0453 315 Pfam 2OG-Fe(II) oxygenase superfamily 168 264 IPR044861 -
Lele37g0453 315 Gene3D - 4 312 IPR027443 -
Lele37g0453 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 91 IPR026992 -
Lele37g0453 315 SUPERFAMILY Clavaminate synthase-like 6 300 - -
Lele37g0453 315 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 302 - -
Lele37g0453 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0453 Lele-ChrLele37 3735936 3737959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0453 3 297 Glycosyltransferase AT5G59530 26.562 1.44e-17 80.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0453 37 3735936 3737959 Lele37g0453 37 3735936 3737959 ECH
Lele37g0453 37 3735936 3737959 Lele39g0969 39 18536558 18541202 hybridization
Lele37g0453 37 3735936 3737959 Lele40g0400 40 3260151 3261287 hybridization