Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0957 ATGGAGCCAGACCCCAACGCATTTCCCCCCGGTTCCACTTGTGCAGGTCTCAACCGGATTAAGTTCCTGCTTGAAAGCCTTGTGGACCTTGATTTGAACCTTAAGAAGCTCGGATCACGACTGCTCATTCTCAAGGGTGAACCAGTAAAGGTTTTGATTCATTGCTTAAAGGAGTGGAACATCAGAAAGCTTTGCTTTGAGTATGACACTGATCCATATTATCAGGCTTTAGATACTAAAGTTAAGAACTATGCAGTGGCCGCTGGTATTGAGGTTTTCTCTCCTGTGAGTTACACGCTCTTCAAATCAGCGGATATTATACAGAAGAATGGAGAGAAGCCACCCCTTAGTTATCAATTGTTTGTGAAGATTGCTGGACAACCATCATGCGCTCTCTCAACTACGGTTTCCTCACTTCCTCCGGTTGGAAATCTTGGAAGTTGTGAGATTTTTGAAGTTCCAACAATCGAAGAACTTGGATACGAAAATGTTAAACAGGAAGAATTCTGTCCTTTCAAAGGTGGTGAATCAGAAGCGTTGAAGAGGCTGACAGAATGCATGAAGAAAAAGGAGTTCTTGGCCAACTTTGAGAAGCCCAAGGGTAATCCATCTGCTTTTGTTAGACCAGAAACAACTGTTCTATCACCTTATTTGAAAATTCAAGATGTGTATAAAACTATGCCAAAGCATACATCACCACCTGTTTCTCTTCTAGGGCAGTTGTTATGGCCAGACTTTTTCTATATTGTGGCATTTGGGACTCCAAATTGTGATAAGATGAAAGGAAATAGAATGTGCAAGCAGATACCCTGGAAGGATGACGACAAACTTCTTGAAGCTTGGAGGGAGGCTAGGACAGGATTTCCATGGATTGATGCCATCATGGTTCAGGCAATGAATATAAATCCTTGGTTTTCTGTTGTAGCTACTTCAATGGGGTTGGATGCCATCTGGCGTGACATTCTGTGGCATGTTTTCTTACTCGTGGTGACCTGGTATCCAGATATAACGCATCACTAATTCTGTCGTGTTCTTTATAACTGTTGTGATAATATGCTAAGAACTGTCTTTCTGAGACTTGTAAATTTACGTTTTATCAATGAGCTGATTCTGAGTTGTGTTTCAGTTGTGTCTCTTGATTCTGCTATCAAAGAATGCCGAAGAAGAATGGCTGAGGCATACGCGTTGAACAAGGAATTGGATGATTCACGCTTTTATTTCCTTTCACCTAAAGTTCTCAGTCTGAATTCTGAAACAACCTTCAGGCTTCATCTCTCTCTAATGGCGACCGCTTCTCTCACCGTTTTCCGACCCTCCACCATCCGATCCTCAATCAAACCAGAACCGAACAACCGGAAGCAGGTTTCTTCGAACTGGTGGGCTCCGTTGTTCGGAATGTCGTCGGAACCAGACTACATCGATCGCACCGCCATTTCTTCTTCATCGAAGGCCGTTGAAGCGTCGGATGCTGGTAATGAACTCGTCCGAGCCAGATCCAAGTTCGCTCCTGGATGCTTCACCGAGGAAAAGGCCAAAAAACTCCGGATGAAGACCATGGAAACGACAACGTTCCACGATATTATGTACCACTCCGCGATTGCATCCAGGCTCGCGTCCGACGTTTCAAAACAGTTCCAGAAATAA 1644 0.4386 MEPDPNAFPPGSTCAGLNRIKFLLESLVDLDLNLKKLGSRLLILKGEPVKVLIHCLKEWNIRKLCFEYDTDPYYQALDTKVKNYAVAAGIEVFSPVSYTLFKSADIIQKNGEKPPLSYQLFVKIAGQPSCALSTTVSSLPPVGNLGSCEIFEVPTIEELGYENVKQEEFCPFKGGESEALKRLTECMKKKEFLANFEKPKGNPSAFVRPETTVLSPYLKIQDVYKTMPKHTSPPVSLLGQLLWPDFFYIVAFGTPNCDKMKGNRMCKQIPWKDDDKLLEAWREARTGFPWIDAIMVQAMNINPWFSVVATSMGLDAIWRDILWHVFLLVVTWYPDITHHXFCRVLYNCCDNMLRTVFLRLVNLRFINELILSCVSVVSLDSAIKECRRRMAEAYALNKELDDSRFYFLSPKVLSLNSETTFRLHLSLMATASLTVFRPSTIRSSIKPEPNNRKQVSSNWWAPLFGMSSEPDYIDRTAISSSSKAVEASDAGNELVRARSKFAPGCFTEEKAKKLRMKTMETTTFHDIMYHSAIASRLASDVSKQFQK 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0957 547 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 255 304 - -
Lele39g0957 547 Gene3D HUPs 11 174 IPR014729 -
Lele39g0957 547 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 1 100 IPR006050 -
Lele39g0957 547 Gene3D - 98 248 - -
Lele39g0957 547 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 13 147 IPR036155 -
Lele39g0957 547 Pfam DNA photolyase 15 125 IPR006050 -
Lele39g0957 547 Pfam FAD binding domain of DNA photolyase 239 297 IPR005101 -
Lele39g0957 547 PANTHER CRYPTOCHROME 13 297 IPR002081 -
Lele39g0957 547 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 161 299 IPR036134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0957 Lele-ChrLele39 18407674 18412773 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0957 39 18407674 18412773 Lele39g0957 39 18407674 18412773 ECH
Lele37g0467 37 3877602 3881139 Lele39g0957 39 18407674 18412773 hybridization
Lele38g0435 38 3546627 3550225 Lele39g0957 39 18407674 18412773 hybridization