Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0904 ATGGATTGGTTCTCATGGCTTTCAAAAGCAAGCCTTGACCCATCTCTAGTTTATGAATATGGCCTTGTTTTTGCTCACAACGAGCTTGAACAAGAAGACATAGTTTATTTCAACCATGAGTTTCTTCAGAGCATGGGAATCTCCATAGCCAAGCACAGGCTTGAAATTCTCAAGCTTGCAAAGAAGGAAAAGCCCAGAAGAAGAAGAAACAGCTCAAATCATCCAGTGTCAAGGCTCATTAATGGGGCAATCAAGAAGACCAAGAATTGCTTATCAAATTACATTCATTCTCTGATTCACAGGGAAAAATCAGCACTTGTGGTGGTTCCCACCACCACAAGGCCAAGTGATCATCAGGAAACAAGATGGAAGAGTTGTATGGTGAAGAGAAGCAGAAACAATAATAATAAGAAGATGATAGTGAATGGTAACAATTATAAGCAAGAGAGGCTTCTTCTCACAAATGGGAATTCTGCAATAGTTCCTACTGTATCTGTTCTTGCTGGGTTTTCAGTTTCAAGCCCAAAGGTGAAGAATTTGCAGAAGGTGATGAAGAAGATGGCTGAAGAAGAAGAAGATGATGATGATGGGTATTGGTCAGCTGCTCTTGAAGAGATCAGGTGGGATACCATGTTTCAGGATCTAAAGCCAAACTGA 657 0.4064 MDWFSWLSKASLDPSLVYEYGLVFAHNELEQEDIVYFNHEFLQSMGISIAKHRLEILKLAKKEKPRRRRNSSNHPVSRLINGAIKKTKNCLSNYIHSLIHREKSALVVVPTTTRPSDHQETRWKSCMVKRSRNNNNKKMIVNGNNYKQERLLLTNGNSAIVPTVSVLAGFSVSSPKVKNLQKVMKKMAEEEEDDDDGYWSAALEEIRWDTMFQDLKPN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0904 218 SUPERFAMILY SAM/Pointed domain 19 63 IPR013761 -
Lele39g0904 218 CDD SAM_superfamily 2 62 - -
Lele39g0904 218 Gene3D - 1 70 IPR013761 -
Lele39g0904 218 PANTHER OSJNBA0033G05.11 PROTEIN 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0904 Lele-ChrLele39 17966671 17967327 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0770 41 17578063 17582293 Lele39g0904 39 17966671 17967327 CCT
Lele42g0763 42 20644050 20657160 Lele39g0904 39 17966671 17967327 CCT
Lele39g0904 39 17966671 17967327 Lele39g0904 39 17966671 17967327 ECH
Lele37g0522 37 4313853 4314506 Lele39g0904 39 17966671 17967327 hybridization
Lele38g0494 38 4018197 4018853 Lele39g0904 39 17966671 17967327 hybridization