Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0868 ATGGCCATCTCTTCACCTTCGAAATTCACCCTTCTTCGCTCTTTACACTCTCAACGTCGTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCCCTCTCTTTCACTTTTCTTCACTCTGCTTTATCTGCTCTTCAACGTTTCCGCAAATTTCCGCTCAATACGGCAATCCGATGTGCTGAAAGAGAAGTAGCCTCATCTAAGCCAGGTTTTGATCCCAAGGCCGGTGTCTCTGTTTATAAACCCAAATCCTATGAAGTTCTCGTCACTGATGCTGCGAATTCCCTTGCTTATGCTCTTGAAGACGGAAAATCTCGCCTTGAGATTGATTTCCCGCCTTTGCCCAGCAACGTTTCTTCTTATAAGGGATCTTCAGATGAATTCAATGATGCCAACATTCAACTTGCATTGGCTGTTGTGAGAAAGCTCCAGGAAAAGAAGGAGACCAGAGCTTGCATAGTATTCCCTGATAAGCCAGAAAAACGAAGGGCCTCTGAGTTGTTCAAAGCAGCTCTGGATTCAATTGATGGCATCACTATAGGTTCTCTGGATGACGTCCCTGGTGGACCTGTCACTTCATTTTTCAGATCTATTAGAGACACCCTTGATTTTGACTTTGAAGATGAGAATGAAGGCAAGTATTGGGGGGAAAATATTTGTGTGACTATTGTAGGGTGTCGTTGGAAGTCTAGTGATCCCCCTTCACTATACATATTCATCAATTGCAGTACACGAGATCTTGCTTACATAGAGCAGTATGTGGAAAAATTTGCTATGTCAACGCCAACACTTCTATTTAATCTTGAACTAGAAACCCTGCGTGCTGACTTAGGCCTTGTGGGCTTTCCACCTAAAGATTTGCAATACCGATTTCTTTGTCAATTTACTTCAGTGTTCTATATTCGAATCAGAGAGTATTCAAAGACAGTTGCCGTAGCTCCTTATATTGTCAATTACAGTGGAGCAGTGTTTCGCCAGTATCCTGGTCCTTGGCAGGTGATGCTTAAGCAAACAGATGGTTCATATGCTTGCGTAGCTGAGAGTGTAACCCGCTTCACCCTTGGTGAAGCCAAAGAGGAATTGTTGAGGGTCCTGGGACTTCAAGAAGAAGAGGGTAGCTCTCTAGAATTTCTTCGAAAAGGCTATAAGTCAAGCACATGGTGGGAAGAAGATCTTGATTTAGAATTATCTTCTGCATGGCGGAGTTGA 1206 0.4312 MAISSPSKFTLLRSLHSQRRLLSSSSSSSSSLSFTFLHSALSALQRFRKFPLNTAIRCAEREVASSKPGFDPKAGVSVYKPKSYEVLVTDAANSLAYALEDGKSRLEIDFPPLPSNVSSYKGSSDEFNDANIQLALAVVRKLQEKKETRACIVFPDKPEKRRASELFKAALDSIDGITIGSLDDVPGGPVTSFFRSIRDTLDFDFEDENEGKYWGENICVTIVGCRWKSSDPPSLYIFINCSTRDLAYIEQYVEKFAMSTPTLLFNLELETLRADLGLVGFPPKDLQYRFLCQFTSVFYIRIREYSKTVAVAPYIVNYSGAVFRQYPGPWQVMLKQTDGSYACVAESVTRFTLGEAKEELLRVLGLQEEEGSSLEFLRKGYKSSTWWEEDLDLELSSAWRS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0868 401 Pfam Domain of unknown function (DUF1995) 81 357 IPR018962 -
Lele39g0868 401 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 9 388 IPR044687 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0868 Lele-ChrLele39 17586507 17591331 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0561 37 4663527 4677481 Lele39g0868 39 17586507 17591331 hybridization
Lele38g0535 38 4476322 4481085 Lele39g0868 39 17586507 17591331 hybridization