Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0535 ATGGTACCACTCTCCTCGATGGCCATCTCTTCACCTTCGAAATTCACCTTTCTATGCTCTTTACACGTTCCCCCTCCTCTTCTTTCTTCTTCTTCTTCTCTCTCTTTCACTTCTCTTCACTCTGCTTTATCTGCTCCTCAACGTTTCCGTAAATTTCCACTCAATACGGCAATCCGATGTGCTGAAAGAGAAGTAGCTTCACCTAAGCCAGGTTTTGATCCCAATGCCGGTGTCTCTGTTTACAAACCCAAATCCTACGAAGTTCTCGTCGCTGATGCTGCGAATTCCCTCGCTTATTCTCTTGAAGACGGAAAATCTCGCCTTGAGATTGATTTCCCGCCTTTGCCCAGCAACATTTCTTCTTATAAGGGATCTTCAGATGAATTCAATGATGCCAACATTCAACTTGCCTTAGCTGTTGTTAGAAAGCTCCAGGAAAAGAAGCAGACTAGAGCTTGCATAGTATTCCCTGATAAGCCAGAAAAACGAAGGGCCTCTGAGTTGTTCAAAGCAGCTCTGGATTCAATTGATGGAATCACCATAGGTTCTCTGGATGACGTCCCTGGTGGACCTGTGACTTCATTTTTCAGATCCATTAGAGACACCCTTGATTTTGACTTTGAAGATGAGAATGAAGGTCGTTGGAATTCTAGTGAGCCCCCTACACTATACATATTCATTAATTGCAGTACACGAGATCTTGCTTACATAGAGCAGTATGTGGAAAAATTTGCTATGTCAACGCCAACACTTCTATTTAATCTTGAATTAGAAACCCTGCGTGCTGACTTAGGCCTTCTGGGCTTTCCACCTAAAGATTTGCAATACCGTTTTCTTTGTCAATTTACTCCAGTGTTCTATATTCGAATCAGAGACTATTCCAAGACAGTTGCTGTAGCTCCTTATATCGTCAATTACAGTGGAGCACTGTTTCGCCAGTATCCTGGTCCTTGGCAGGTGATGCTTAAGCAAGCAGATGGTTCGTATGCTTGCGTAGCTGAGAGTGCAACCCGCTTCACCCTTGGTGAAGCCAAAGAGGAATTGTTGAGGGTCCTGGGACTTCAAGAAGAAGAGGGTAGCTCTCTAGAATTTCTCCGAAAAGGCTACAAGTCAAGCACATGGTGGGAAGAAGATGTTGGGTTAGAAGTATCTTCTGCATGGCGGAGTTGA 1170 0.441 MVPLSSMAISSPSKFTFLCSLHVPPPLLSSSSSLSFTSLHSALSAPQRFRKFPLNTAIRCAEREVASPKPGFDPNAGVSVYKPKSYEVLVADAANSLAYSLEDGKSRLEIDFPPLPSNISSYKGSSDEFNDANIQLALAVVRKLQEKKQTRACIVFPDKPEKRRASELFKAALDSIDGITIGSLDDVPGGPVTSFFRSIRDTLDFDFEDENEGRWNSSEPPTLYIFINCSTRDLAYIEQYVEKFAMSTPTLLFNLELETLRADLGLLGFPPKDLQYRFLCQFTPVFYIRIRDYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQADGSYACVAESATRFTLGEAKEELLRVLGLQEEEGSSLEFLRKGYKSSTWWEEDVGLEVSSAWRS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0535 389 Pfam Domain of unknown function (DUF1995) 83 345 IPR018962 -
Lele38g0535 389 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 12 376 IPR044687 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0535 Lele-ChrLele38 4476322 4481085 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0535 38 4476322 4481085 Lele39g0868 39 17586507 17591331 hybridization
Lele38g0535 38 4476322 4481085 Lele40g0506 40 4289329 4294078 hybridization