Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0561 ATGGTACTACTCTCCTCCATGGCCATCTCTTCACCTTCGAAATTCACCCTTCATCGCTCTTTACACTCTCAACGTCCTCTTCTTTCTTCTTCTTCTTCTTCCGTCTCTTTCACTTTTCTTCACTCTGGTTTATCTGCTCCTCAACGTTTCCGCAAATTTCCGCTCAATACGGCAATCCGATGTGCTGAAAGAGAAGTAGCCTCATCGAAGCCAGGTTTTGATCCCAAGGCCGGTGTCGCTGTTTATAAACCCAAATCCTATGAAGTTCTCGTCACTGATGCTGCGAATTCCCTCGCTTATGCTCTTGAAGACGGAAAACCTCGCCTTGAGATTGATTTCCCGCCTTTGCCCAGCAACATTTCTTCTTATAAGGGATCTTCAGATGAATTCAATGATGCCAACATTCAACTTGCATTGGCTGTTGTGAGAAAGCTCCAGGAAAAGAAGGAGACCAGAGCTTGCATAGTATTCCCTGATAAGCCAGAAAAACGAAGGGCCTCTGTGTTGTTCAAAGCAGCTCTGGATTCAATTGATGGCATCACCATAGGTTCTCTGGATGACGTCCCTGGTGGACCTGTCACTTCATTTTTCAGATCTATTAGAGACACCCTTGATTTTGACTTTGAAGATGAGAATGAAGGTCGTTGGAAGTCTAGTGAGCCCCCTTCACTATACATATTCATCAATTGCAGTACACGAGATCTTGCTTACATAGAGCAGTATGTGGAAAAATTTGCTATGTCAACGCCCACACTTCTATTTAATCTTGAACTAGAAACCCTGCGTGCTGACTTAGGCCTTGTGGGCTTTCCACCTAAAGATTTGCAATACCGATTTCTTTGTCAATTTACTTCAGTGTTCTATATTCCAATCAGAGAGTATTCAAAGACAGTTGCCGTAGCTCCTTATATTGTCAATTACAGTGGAGCACTGTTTCGCCAGTATCCTGGTCCTTGGCAGGTGATGCTTAAGCAAACGGATGGTTCATATGCTTGCGTAGCTGAGAGTGCAACCCGCTTCACCCTTGGTGAAGCCAAAGAGGAATTGTTGAGGGTCCTGGGACTTCAAGAAGAAGAGGGTAGCTCTCTAGAATTTCTTCGAAAAGGCTACAAGTCTAGCACATGGTGGGAAGAAGATCTTGAGTTAGAATTATCTTCTGCATGGCGGAGTTGA 1173 0.4433 MVLLSSMAISSPSKFTLHRSLHSQRPLLSSSSSSVSFTFLHSGLSAPQRFRKFPLNTAIRCAEREVASSKPGFDPKAGVAVYKPKSYEVLVTDAANSLAYALEDGKPRLEIDFPPLPSNISSYKGSSDEFNDANIQLALAVVRKLQEKKETRACIVFPDKPEKRRASVLFKAALDSIDGITIGSLDDVPGGPVTSFFRSIRDTLDFDFEDENEGRWKSSEPPSLYIFINCSTRDLAYIEQYVEKFAMSTPTLLFNLELETLRADLGLVGFPPKDLQYRFLCQFTSVFYIPIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQTDGSYACVAESATRFTLGEAKEELLRVLGLQEEEGSSLEFLRKGYKSSTWWEEDLELELSSAWRS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0561 390 Pfam Domain of unknown function (DUF1995) 84 346 IPR018962 -
Lele37g0561 390 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 5 377 IPR044687 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0561 Lele-ChrLele37 4663527 4677481 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0561 37 4663527 4677481 Lele39g0868 39 17586507 17591331 hybridization
Lele37g0561 37 4663527 4677481 Lele40g0506 40 4289329 4294078 hybridization