Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1253 ATGGATGAGCTTCCTTTGCACAAGATTGCAATCTCGGGCCCAACCTTGGCCTCCGTCATCCAACGCTTCTCCACCTCCCCCGGCGCCGTCGACGGCCTCCTCTTCGGCCACGTCACCTACATCACCCCGTCCACACTCTCCGACGACTCCGAATCCGAATCCTCCACTCTTGTCGCCACCATCACCGGTTTCCTGTGCTCCGGCACCATCAATAGCTTCTATGACTCCACTGGTGCCGTCGAACTTCACTCACTTCGCCGCCTTCTCACTGACCCCGTTCTCACCCACCACCCCTCCCTCATCGGTTGGTTCTCCGGTCGCCGTAAAACGCATCTCCGGCCGTCAATGCGAGAATTCGCTGTCACCGCCTCTCTTTCTTCCATGACGCAGTTCGCTTTTCCTGTCAAGAATGCTCCTGGGTCTACCAATTTTAACCCTTGTGTGTTCTTACTATTAGCATCGCCGTTATCGGACCAATCCATCCATACTCATGAGTACCGCGCTTACCAATTCCGCAAAGTTACCGAGTCTTTCGACCCTAAATCATTGGATATTGTTAACGTTGGGCCTGCGTTTCGCGGGCATTATGGTTCTTTTAGCCCTAATGCTCCCTTCCCATCATTGGCTTGCGATTTTCGGAACTCGCCTATGAATGAGGACAAGGATGAGAGGAGTTTAAATCAAATGAAGAATGTTTCTAAGGATCAGAGAGAGCTGGATACGTGTGCAGACGGATTTGATGTCAGGAGCTTGAATCGTTTGGTGGGGTCAGAAGCAACGAATTATACTTCTGGCTTGGAGGATTTGTATGAGAAAATGCTTGTTAAAATTGAAAATTTGGCCAGACAAGTTGAAAGCAGTTCTGCTAATGTTCTTGAGCAGGAAAACCATAATAGGAGGATGAGATACAAAATTTTCAGGTCTGCTGTCACAGAATAA 939 0.4952 MDELPLHKIAISGPTLASVIQRFSTSPGAVDGLLFGHVTYITPSTLSDDSESESSTLVATITGFLCSGTINSFYDSTGAVELHSLRRLLTDPVLTHHPSLIGWFSGRRKTHLRPSMREFAVTASLSSMTQFAFPVKNAPGSTNFNPCVFLLLASPLSDQSIHTHEYRAYQFRKVTESFDPKSLDIVNVGPAFRGHYGSFSPNAPFPSLACDFRNSPMNEDKDERSLNQMKNVSKDQRELDTCADGFDVRSLNRLVGSEATNYTSGLEDLYEKMLVKIENLARQVESSSANVLEQENHNRRMRYKIFRSAVTE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1253 312 Coils Coil 277 297 - -
Lele38g1253 312 PRINTS Protein family FAM175 signature 11 29 IPR023238 -
Lele38g1253 312 PRINTS Protein family FAM175 signature 102 118 IPR023238 -
Lele38g1253 312 PRINTS Protein family FAM175 signature 72 91 IPR023238 -
Lele38g1253 312 PRINTS Protein family FAM175 signature 182 196 IPR023238 -
Lele38g1253 312 PRINTS Protein family FAM175 signature 31 48 IPR023238 -
Lele38g1253 312 PRINTS Plant protein family FAM175 signature 244 264 IPR023241 -
Lele38g1253 312 PRINTS Plant protein family FAM175 signature 1 17 IPR023241 -
Lele38g1253 312 PRINTS Plant protein family FAM175 signature 190 210 IPR023241 -
Lele38g1253 312 PRINTS Plant protein family FAM175 signature 267 293 IPR023241 -
Lele38g1253 312 PRINTS Plant protein family FAM175 signature 218 238 IPR023241 -
Lele38g1253 312 PRINTS Plant protein family FAM175 signature 42 66 IPR023241 -
Lele38g1253 312 PRINTS Plant protein family FAM175 signature 153 173 IPR023241 -
Lele38g1253 312 PANTHER ABRAXAS FAMILY MEMBER 5 308 IPR023238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1253 Lele-ChrLele38 23359250 23360492 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1253 38 23359250 23360492 Lele39g0047 39 338129 340336 hybridization
Lele38g1253 38 23359250 23360492 Lele40g1195 40 21854407 21855658 hybridization