Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0047 ATGGTATGGTTAACCTGCAATATTGTTATAGATACTCTTGCCACCGACATGGATGAGCTTCCTTTGCACAAGATTGCTATCTCGGGCCCTACCTTGGCCTCCGTCATCCAACGCTTCTCCACCTCCCCCGGCGCCGTCGACGGCCTCCTCTTCGGCCACTTCACCTACATCACCCCTTCCACTCTCTCCGACGACTCCGAATCCGAATCCTCCACCCTTGTCGCTACCATCACCGGTTTCCTCTGCTCCGGCACCATCAATAGCTTCTATGACTCCACTGGTGCCGTCGAACTTCACTCACTTCGCCGCCTTCTCACTGACCCTGTCCTCAACCACCACCCCTCCCTCATCGGTTGGTTCTCCGGTCGCCGTAAAACCCATCTCCGGCCATCAATGCGAGAATTCGCTGTCACTGCCTCTCTTTCTTCCATGACGCAGTTCGCTTTTCCTGTCAAGAATGCTCCTGGGTCTACCAATTTTAACCCTTGTGTGTTCTTACTATTAGCATCGCCATTGTCGGACCAATCCATCCATACTCATGAGTACCGCGCTTACCAATTTCGCAAAGTTACAGGGTCTTTCGACCCTAAATCATTGGATATTGTTAACATTGGGCCAGCGTTTCGCGGGCATTTTGGTTCTTTTAGCCCTAATGCTCCCTTCCCATCATTGGCTTGCGATTTTCGGAACTCGCCTATGAATGAGGACCGGGATGAGAGGAGTTTAAATCAAATGAAAAATGCTTCTAAGGATCAGAGAGAGCTGGATACGTGTGCAGACGGATTTGATGTCGGGAGATTGAATCGTTTGGTGGGGTCAGAAGCAACTAATTATACTTCTGGCTTGGAGGATTTGTATGAGAAAATGCTTGTTAAAATTGAAAATTTGGCCAGACAAGTTGAAAGCAGTTCTGCTAAGGTTCTTGAGCAGGAAAACAGTAATAGGAGGTTGAGATACAAAATTTTGACGTCTCCTATCACAGAATAA 987 0.4843 MVWLTCNIVIDTLATDMDELPLHKIAISGPTLASVIQRFSTSPGAVDGLLFGHFTYITPSTLSDDSESESSTLVATITGFLCSGTINSFYDSTGAVELHSLRRLLTDPVLNHHPSLIGWFSGRRKTHLRPSMREFAVTASLSSMTQFAFPVKNAPGSTNFNPCVFLLLASPLSDQSIHTHEYRAYQFRKVTGSFDPKSLDIVNIGPAFRGHFGSFSPNAPFPSLACDFRNSPMNEDRDERSLNQMKNASKDQRELDTCADGFDVGRLNRLVGSEATNYTSGLEDLYEKMLVKIENLARQVESSSAKVLEQENSNRRLRYKILTSPITE 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0047 328 PANTHER ABRAXAS FAMILY MEMBER 21 323 IPR023238 -
Lele39g0047 328 PRINTS Protein family FAM175 signature 27 45 IPR023238 -
Lele39g0047 328 PRINTS Protein family FAM175 signature 88 107 IPR023238 -
Lele39g0047 328 PRINTS Protein family FAM175 signature 198 212 IPR023238 -
Lele39g0047 328 PRINTS Protein family FAM175 signature 118 134 IPR023238 -
Lele39g0047 328 PRINTS Protein family FAM175 signature 47 64 IPR023238 -
Lele39g0047 328 Coils Coil 293 313 - -
Lele39g0047 328 PRINTS Plant protein family FAM175 signature 169 189 IPR023241 -
Lele39g0047 328 PRINTS Plant protein family FAM175 signature 17 38 IPR023241 -
Lele39g0047 328 PRINTS Plant protein family FAM175 signature 206 226 IPR023241 -
Lele39g0047 328 PRINTS Plant protein family FAM175 signature 234 254 IPR023241 -
Lele39g0047 328 PRINTS Plant protein family FAM175 signature 283 309 IPR023241 -
Lele39g0047 328 PRINTS Plant protein family FAM175 signature 260 280 IPR023241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0047 Lele-ChrLele39 338129 340336 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1376 37 22589289 22590281 Lele39g0047 39 338129 340336 hybridization
Lele38g1253 38 23359250 23360492 Lele39g0047 39 338129 340336 hybridization