Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1195 ATGGATGAGCTTCCTTTGCACAAGATTGCAATCTCGGGCCCAACCTTGGCCTCCGTCATCCAACGCTTCTCCACCTCCCCCGGCGCCGTCGACGGCCTCCTCTTCGGCCACGTCACCTACATCACCCCGTCCACACTCTCCGACGACTCCGAATCCGAATCCTCCACCCTTGTCGCCACCATCACCGGTTTCCTCTGCTCCGGCACCATCAATAGCTTCTATGACTCCACTGGTACCGTCGAACTTCACTCACTTCGCCGCCTTCTCACTGACCCCGTTCTCACCCACCACCCCTCCCTCATCGGTTGGTTCTCCGGTCGCCGTAAAACCCATCTCCGGCCATCAATGCGAGAATTCGCTGTCACCGCCTCTCTTTCTTCCATGACGCAGTTCGCTTTTCCTGTCAAGAACGCTCCTGGGTCTACCAATTTTAACCCTTGTGTGTTCTTACTATTAGCATCGCCGTTACTATTAGTATCGGACCAATCCATCCATACTCATGAGTACCGCGCTTACCAATTCCGCAAAGTTACCGAGTCTTTCGACCCTAAATCATTGGATATTGTTAACGTTGGGCCTGCGTTTCGTGGGCATTATGGTTCTTTTAGCCCTAATGCTCCCTTCCCATCATTGGCTTGCGATTTTCGGAACTCGCCTATGAATGAGGACAAGGATGAGAGGAGTTTAAATCAAATGAAGAATGTTTCTAAGGATCAGAGAGAGCTGGATACGTGTGCAGACGGATTTGATGTCGGGAGCTTGAATCGTTTGGTGGGGTCAGAAGCAACGAATTATACTTCTGGCTTGGAGGATTTGTATGAGAAAATGCTTGCTAAAATTGAAAATTTGGCCAGACAAGTTGAAAGCAGTTCTGCTAATGTTCTTGAGCAGGAAAACCATAATAGGAGGTTGAGATACAAAATTTTCAGGTCTGCTGTCACAGAATGA 948 0.4947 MDELPLHKIAISGPTLASVIQRFSTSPGAVDGLLFGHVTYITPSTLSDDSESESSTLVATITGFLCSGTINSFYDSTGTVELHSLRRLLTDPVLTHHPSLIGWFSGRRKTHLRPSMREFAVTASLSSMTQFAFPVKNAPGSTNFNPCVFLLLASPLLLVSDQSIHTHEYRAYQFRKVTESFDPKSLDIVNVGPAFRGHYGSFSPNAPFPSLACDFRNSPMNEDKDERSLNQMKNVSKDQRELDTCADGFDVGSLNRLVGSEATNYTSGLEDLYEKMLAKIENLARQVESSSANVLEQENHNRRLRYKIFRSAVTE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1195 315 PRINTS Protein family FAM175 signature 185 199 IPR023238 -
Lele40g1195 315 PRINTS Protein family FAM175 signature 11 29 IPR023238 -
Lele40g1195 315 PRINTS Protein family FAM175 signature 72 91 IPR023238 -
Lele40g1195 315 PRINTS Protein family FAM175 signature 102 118 IPR023238 -
Lele40g1195 315 PRINTS Protein family FAM175 signature 31 48 IPR023238 -
Lele40g1195 315 PRINTS Plant protein family FAM175 signature 156 176 IPR023241 -
Lele40g1195 315 PRINTS Plant protein family FAM175 signature 42 66 IPR023241 -
Lele40g1195 315 PRINTS Plant protein family FAM175 signature 221 241 IPR023241 -
Lele40g1195 315 PRINTS Plant protein family FAM175 signature 247 267 IPR023241 -
Lele40g1195 315 PRINTS Plant protein family FAM175 signature 1 17 IPR023241 -
Lele40g1195 315 PRINTS Plant protein family FAM175 signature 193 213 IPR023241 -
Lele40g1195 315 PRINTS Plant protein family FAM175 signature 270 296 IPR023241 -
Lele40g1195 315 PANTHER ABRAXAS FAMILY MEMBER 5 311 IPR023238 -
Lele40g1195 315 Coils Coil 273 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1195 Lele-ChrLele40 21854407 21855658 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1376 37 22589289 22590281 Lele40g1195 40 21854407 21855658 hybridization
Lele38g1253 38 23359250 23360492 Lele40g1195 40 21854407 21855658 hybridization