Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1187 ATGGAAGCTCTCACGAGTTCTTGCTCTAAGGCCAGTTTTTATGGCCTTGGATCTTCTTCTCCGAGGCTTGTTTCTTCCTTTCATTTCTCCGACAGGCTTCAATTTTCCTTATCCAATGATAAAGTCGGCAACTTTCGGTTCCTTCAAATGGTTCAAAACAAGGGTGTCTTGATTTCCCCAGTTCATGCCATGCCATCCGAACCCCAGGTGGAATTGGAAACTGAAGAGCCTCAAGCACAGCAATATGGTGATGATCCTATGATTGGTGATTGGGATCCTTCAAATGCACTACCAATGACCTGGTCAGAAGGGCATAAATGGTTTGTTGAGATGGATGAGCCTGCTGGGAAATCAATTCAATACAAGTTTATTCTGAAATCAACATCTGGAGATATTATTTGGCAGCCGGGGTCGGACCGAATTTTTAAGACTTGGGAAACTGTTAACAGAATAACTGTTTGTGAGGATTGGGAGAATGCTGAGCTTCAGAAAATAGTAGAGGAAGATCAATCTGATTACTCAAATGGGGAACCCCTGATTGATCCAGAAATGCCAAATTTTTCTGAAGAAGAGACGGTATCTGATGCAACCGATGCACTAGACTTTGAAGGCATCAAAACTCATTTAGAGGAGAAACCACTTGCTCAACCAGACGTGCAACAAATTATAGGTGATAATGCTTCTTCTTCTTCCATGGAGAAGCCAATGGCTATTGTTGCAGAAAATATAGATTCATCAGAAGACGCCCCTAAGAATACGCCTCGCAGAAGAGGTGTGAACAATATGGCTCTTCAGAGTGAAGTTACAGTTCATGATCTTGAAAACATGGGAAAAGCTTCACAAGTCAATAATCAGGAAAAGGAAGTTGTGAAGAGCAACCTATTTGAATTTGAAGGAAGTCCTGTTCTTGTACCTGGCTTGACTCCACCTAAATCTGAAGAAACAACTAATAACGATAAAGTTGAAGAGAGGACTACCATGGACACTTCAGTTCAAGAACTTGAAACCAAGGATCAGAACAAGCCAGAGTTCAATGAGGAACTAGAAGAATCAGATGACGGGGTCCAGGTCAATGAAGAGGACCAAGAAGAATCAGAAGATGGTAAACCCCAAGAGATGTCTGAAACACTCAGTGAAGAGCCAGAGTTGGTTGACAATGAATTTCAAGAGAAGTTTCATTCAACCACAGCAATAGTTAAAGTTCCTGAGGTTCACACGGCTCATGAAATTGTCTTGGAAAGTGACATTCAATGGGGCCGTGGAATATTAAAGAAGCTTCTATCAAAACTCGGATCGCTGAGAAAAATTCTTCAGTAG 1317 0.4169 MEALTSSCSKASFYGLGSSSPRLVSSFHFSDRLQFSLSNDKVGNFRFLQMVQNKGVLISPVHAMPSEPQVELETEEPQAQQYGDDPMIGDWDPSNALPMTWSEGHKWFVEMDEPAGKSIQYKFILKSTSGDIIWQPGSDRIFKTWETVNRITVCEDWENAELQKIVEEDQSDYSNGEPLIDPEMPNFSEEETVSDATDALDFEGIKTHLEEKPLAQPDVQQIIGDNASSSSMEKPMAIVAENIDSSEDAPKNTPRRRGVNNMALQSEVTVHDLENMGKASQVNNQEKEVVKSNLFEFEGSPVLVPGLTPPKSEETTNNDKVEERTTMDTSVQELETKDQNKPEFNEELEESDDGVQVNEEDQEESEDGKPQEMSETLSEEPELVDNEFQEKFHSTTAIVKVPEVHTAHEIVLESDIQWGRGILKKLLSKLGSLRKILQ 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1187 438 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 50 159 IPR002044 GO:2001070
Lele38g1187 438 MobiDBLite consensus disorder prediction 315 344 - -
Lele38g1187 438 MobiDBLite consensus disorder prediction 345 368 - -
Lele38g1187 438 SMART CBM_20_2 69 154 IPR002044 GO:2001070
Lele38g1187 438 CDD CBM20 83 157 - -
Lele38g1187 438 PANTHER STARCH-BINDING DOMAIN-CONTAINING PROTEIN 1 83 160 - -
Lele38g1187 438 SUPERFAMILY Starch-binding domain-like 83 156 IPR013784 GO:0030246
Lele38g1187 438 MobiDBLite consensus disorder prediction 300 382 - -
Lele38g1187 438 Pfam Starch binding domain 83 149 IPR002044 GO:2001070
Lele38g1187 438 Gene3D Immunoglobulins 80 158 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1187 Lele-ChrLele38 22901041 22903788 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1187 38 22901041 22903788 Lele39g0120 39 809746 812555 hybridization
Lele38g1187 38 22901041 22903788 Lele40g1127 40 21395306 21398162 hybridization