Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0997 ATGATGAGGGTGCTTAGCTGGTCACAGCGGATACCCGAAAAGTCCCTGCGGCCCTTCTGCACTCTCAACCAGGAGCCGATTGATTTGATTCTTTTCGAACAAGCTTCCCCTCTCTCTCCCTATCTCTCTTGGCCTCAGTTCCTCATCTGCGATAGCGTCAAAAAGGCTGTCGTTTTCTTGCTTTTGGCCGACTCAAAAACTGGTTTTTTCATATTCTCTGATCCTTTCTGGACTTGGGCATTCAACGTCTCGTTGAAGATGTATTCTGATCGGGTGGAGACTGGAGCGAGGAGGTCAATAAAGGAACGTCTTAATGGCACTTTTGTCAGTGACTCTACCCGCCCGCGGCAAATCACCGGAAAGAGGCAGAGACAAGATGACAAATGGGAGCATGATCTTTTTGAGGATGATGAACCACGAGTTTCTAAACGCCAAGTTGGTGGTCAAGATCTTCGCCTGAAGCTTCAGAAAAAGGGTCTTCAATCAGCTGCTCAGAGTGGAAAGAATCCTGTTCCAGGTATGCATGATCTACGTGAAAAGTTATCAGGGACGATGACTCAACAACCTAAAATCTCAGATCCACCAAAGTCGAAAGTTGTTGTTAAACCAAGCAGTAAAAGTGTCATTGTTGAGGCTCCTGTGCCACATAATAAAAGAGCAACTAACCCAGCTCCCAGAAAGAAGGCATCACAAAAGACTGGTACTTCAGTGGATGAATTTTTGCATTCCCTGGGTCTTGAGAAGTATCTCATAAATTTTCAAGCTGAAGAAGTTGATATGACAGCTCTTATGCACATGACTGATGATGATCTCAAGGTCATGGGAATACCGATGGGGCCAAGGAAGAAGATACTTTTAGCTTTAGAGTCAAAGGGTTGA 879 0.4516 MMRVLSWSQRIPEKSLRPFCTLNQEPIDLILFEQASPLSPYLSWPQFLICDSVKKAVVFLLLADSKTGFFIFSDPFWTWAFNVSLKMYSDRVETGARRSIKERLNGTFVSDSTRPRQITGKRQRQDDKWEHDLFEDDEPRVSKRQVGGQDLRLKLQKKGLQSAAQSGKNPVPGMHDLREKLSGTMTQQPKISDPPKSKVVVKPSSKSVIVEAPVPHNKRATNPAPRKKASQKTGTSVDEFLHSLGLEKYLINFQAEEVDMTALMHMTDDDLKVMGIPMGPRKKILLALESKG 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0997 292 SUPERFAMILY SAM/Pointed domain 232 289 IPR013761 -
Lele38g0997 292 PANTHER SCP160 194 288 - -
Lele38g0997 292 SMART SAM_4 229 292 IPR001660 GO:0005515
Lele38g0997 292 MobiDBLite consensus disorder prediction 110 235 - -
Lele38g0997 292 FunFam Sterile alpha motif domain-containing protein 234 292 - -
Lele38g0997 292 ProSiteProfiles SAM domain profile. 232 286 IPR001660 GO:0005515
Lele38g0997 292 Gene3D - 234 292 IPR013761 -
Lele38g0997 292 Pfam SAM domain (Sterile alpha motif) 233 289 IPR001660 GO:0005515
Lele38g0997 292 CDD SAM_superfamily 236 289 - -
Lele38g0997 292 MobiDBLite consensus disorder prediction 117 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0997 Lele-ChrLele38 21492959 21498376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0997 123 291 Glycosyltransferase AT3G07170 62.353 2.97e-62 193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0997 38 21492959 21498376 Lele39g0297 39 2031867 2036126 hybridization
Lele38g0997 38 21492959 21498376 Lele40g0936 40 19890030 19895061 hybridization