Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0421 ATGGGCTCAGAAACCATTCTTAAGCTTCGAGTCATTGACTTTAACGGCCTTGACTCGGAAATCAAAAGCGCTAAGTGGGAGGAAGTGAAAACCCAAGTCCACAAAGCACTTGTAGAGTGTGGTTGCTTTGAGGCTTTGTTCGATAAGGTTCCTTTAGAGCTTAAGAAATCCTTATTTGTTGTTCTCAAAGAGCTCTTTGATCTGCCTCTTCAAACCAAACAACGAAATGTGTATCCGAAGCATTTTCATGGCTATGTTGGGCAACACCCTGCTGTGCCGCTCTTTGAAAGCTTGGGCGTTGATGATGCAAATGTCCTTGAGAAAGTTGAGAGCTTTGAACATACCTTGTGGCCTGAAGGATACCCAAGTTTCAGCAAAACTGTACAAGCTTTCTCAGAGCAGGTATCAGAGTTGGATCAAATAGTGAGGAAGATGGTTCTGGAAAGTTTGGGAGTTGACAAGTACTTGGATGAGCACATGAACTCAACCAATTACCTTCTTAGGGTTATGAAATACTCTAACCCTCAAAGTGAAGACGAAAAGCTGGGTCTTGCCTCTCACAGAGATAAGAATATAATAACCACATTGTGCCAATTAAATGAGGTTTCGGGTTTTGAAGTTGAAACCAAAGATGGAAAAGAATGGATCGCTTACCAGCCCTCCTCGCCTCATAGTTTCATCGTATTAGCTGGCGACGCACTATTTGCATGGACAAATGGGAGGGTACATTCGGCATTTCACAGGGTGCTGATGAAAGGGAATGAGGCGAGATACTCAGCAGGACTCTTTTCGGTAACGAAAGGAGGGTTTATGGTTAAAACACCAGAAGAGCTGGTGGACGAAGAACACCCTCTTTTGTTTAAGCCCTTTGATTACGCTGAGTTTCTCAAATACTTATCCAATGAAGAGGCCCAGGGACAGAAATTTGCTTTGAAGGCTTATTGTGGTGTTTGA 954 0.4329 MGSETILKLRVIDFNGLDSEIKSAKWEEVKTQVHKALVECGCFEALFDKVPLELKKSLFVVLKELFDLPLQTKQRNVYPKHFHGYVGQHPAVPLFESLGVDDANVLEKVESFEHTLWPEGYPSFSKTVQAFSEQVSELDQIVRKMVLESLGVDKYLDEHMNSTNYLLRVMKYSNPQSEDEKLGLASHRDKNIITTLCQLNEVSGFEVETKDGKEWIAYQPSSPHSFIVLAGDALFAWTNGRVHSAFHRVLMKGNEARYSAGLFSVTKGGFMVKTPEELVDEEHPLLFKPFDYAEFLKYLSNEEAQGQKFALKAYCGV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0421 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 296 - -
Lele38g0421 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 267 IPR005123 -
Lele38g0421 317 SUPERFAMILY Clavaminate synthase-like 7 301 - -
Lele38g0421 317 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 304 - -
Lele38g0421 317 Pfam 2OG-Fe(II) oxygenase superfamily 164 263 IPR044861 -
Lele38g0421 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 87 IPR026992 -
Lele38g0421 317 Gene3D - 8 315 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0421 Lele-ChrLele38 3411973 3414129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0421 118 288 Glycosyltransferase AT5G59530 27.841 9.52e-11 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0421 38 3411973 3414129 Lele38g0421 38 3411973 3414129 ECH
Lele38g0421 38 3411973 3414129 Lele39g0971 39 18543950 18544557 hybridization
Lele38g0421 38 3411973 3414129 Lele40g0398 40 3247099 3249225 hybridization