Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0398 ATGGGCTCAGAAACCATTCTTAAGCTTCGAGTCATTGACTTTAACGGCCTTGACTCGGAAATCAAAAGCCCTAAGTGGGAGGAAGTGAAAACCCAAGTCCACAAAGCACTTGTAGAGTGTGGTTGCTTTGAGGCTTTGTTCGATAAGGTTCCTTTAGAGCTTAAGAAATCCTTATTTGTTGTTCTCAAAGAGCTCTTTGATCTGCCTCTTCAAACAAAACAACGAAATGTGCCTAAGAAGCATTTTCATGGCTATGCTGGGCAATACCCTGCTGTGCAGCTCTTTGAAACCTTGGGCGTTGATGATGCAAATGTCCTTGAGAAAGTTGAGAGCTTTGAACATACCTTGTGGCCTGAAGGATACCCAAGTTTCAGCAAAACTGTACAAGCTTTCTCAGAGCAGGTATCAGAGTTGGATCAAATAGTGAGGAAGATGGTTCTGGAAAGTTTGGGAGTTGACAAGTACTTGGACGAGCACATGAACTCAACCAATTACCTTCTTAGGGTTATGAAATACTCTAACCCTCAAAGTGAAGTCGAAAAGCAGGGTCTTGCCTCGCACAGATATAAGAATATAATAACCGCATTGTGCCAATTAAATGAGGTTTCGGGTTTTGAAGTTGAAACCAAAGATGGAAAAGAATGTATCGCTTACCAGCCCTCCTCGCCTCATAGTTTCATCGCATGGACAAATGGGAGGGCACATTCGGCATTTCACAGGGTGATGATGAAAGGAAATGAGGCGAGATACTCAGCAGGACTGCTTTCGGTAACGAAAGGAGGGTTTATGGTTAAAACACCAGAAGAGCTGGTGGACGAAGAACACCCTCTTCTGTTTAAGCCCTTTGATTACGCTGAGTTTCTCAAATACTCATCCAATGAAGAGGCCCAGAGACAGAAATTTGCTCTGAAGGCTTATTAA 921 0.4321 MGSETILKLRVIDFNGLDSEIKSPKWEEVKTQVHKALVECGCFEALFDKVPLELKKSLFVVLKELFDLPLQTKQRNVPKKHFHGYAGQYPAVQLFETLGVDDANVLEKVESFEHTLWPEGYPSFSKTVQAFSEQVSELDQIVRKMVLESLGVDKYLDEHMNSTNYLLRVMKYSNPQSEVEKQGLASHRYKNIITALCQLNEVSGFEVETKDGKECIAYQPSSPHSFIAWTNGRAHSAFHRVMMKGNEARYSAGLLSVTKGGFMVKTPEELVDEEHPLLFKPFDYAEFLKYSSNEEAQRQKFALKAY 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0398 306 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 289 - -
Lele40g0398 306 Pfam 2OG-Fe(II) oxygenase superfamily 160 252 IPR044861 -
Lele40g0398 306 SUPERFAMILY Clavaminate synthase-like 7 291 - -
Lele40g0398 306 Pfam non-haem dioxygenase in morphine synthesis N-terminal 11 87 IPR026992 -
Lele40g0398 306 Gene3D - 8 305 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0398 Lele-ChrLele40 3247099 3249225 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0398 40 3247099 3249225 Lele40g0398 40 3247099 3249225 ECH
Lele37g0451 37 3728585 3730608 Lele40g0398 40 3247099 3249225 hybridization
Lele38g0421 38 3411973 3414129 Lele40g0398 40 3247099 3249225 hybridization