Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0971 ATGGACCAAACTGACATAAGATTACTGTTTGATGCTTATGGTTTGGACAAAAGACACTGTGATTCCCTGCTGGAATCAACCAGTTACAACCTCCGAAGCTTTAAATACCTCGTACCCAAGAATGATGAGAATAATTTAGGACTGAAAGCTCACACAGACGTATCATACTTCAGCATACTGCATCAGAATAATGTGACAGGTTTGCAAGTTAAACCAAAGAGTGGTGAATGGATCGATGTTGATTCCTCACCCTCCATGTTTCTGTTCCTGGCAGGTGATGCATTAAAGGTTTGGAGTAATGACAGAATACCAGCTTGTGAACACCAAATCATCGTAAAGGAAAAGAAGGAAAGGTGTTCCATGGGATTATTTTCATTTAACAGTAAGAAGGTTGAGACACAAGAAGAGCTAGTTGATGAGGACCATCCATTACGATATAAAGCATTTGATCATTATGAATACCTGATATTTCGTGAGAAGTTTCCTTCACAAATTTCCAGTTTTCTTCTGGTGTGA 516 0.3895 MDQTDIRLLFDAYGLDKRHCDSLLESTSYNLRSFKYLVPKNDENNLGLKAHTDVSYFSILHQNNVTGLQVKPKSGEWIDVDSSPSMFLFLAGDALKVWSNDRIPACEHQIIVKEKKERCSMGLFSFNSKKVETQEELVDEDHPLRYKAFDHYEYLIFREKFPSQISSFLLV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0971 171 Gene3D - 3 157 IPR027443 -
Lele39g0971 171 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 27 128 IPR005123 -
Lele39g0971 171 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 21 154 - -
Lele39g0971 171 SUPERFAMILY Clavaminate synthase-like 7 158 - -
Lele39g0971 171 Pfam 2OG-Fe(II) oxygenase superfamily 34 126 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0971 Lele-ChrLele39 18543950 18544557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0971 45 154 Glycosyltransferase AT5G59530 30.435 2.01e-13 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0971 39 18543950 18544557 Lele39g0971 39 18543950 18544557 ECH
Lele37g0451 37 3728585 3730608 Lele39g0971 39 18543950 18544557 hybridization
Lele38g0421 38 3411973 3414129 Lele39g0971 39 18543950 18544557 hybridization