Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0377 ATGGTGGAGCAGGAAGGTTACATGTCGAAGCTTTTCAATTTCAAAGGTAGGCACAAGAAGAGCTTGAGCGTTGAGACTGGAAGCATTCTAGAATCTTCAAAAGAGGAAGATCCATTGTCTTCTTCAAGAAGCCAAGGAACAAACCCTCTTAATGAAGAGTCTGCTAATTCTGATCAAAATGGAGGTGCTCCTGATAAGCCAAGCCCAACAGTTGAAGAAGATGCAGCAGTCAAAGCAGTTAGAGAGAAACTACAACAAGAAATGGAACAGATGAAAGAGAAATTTTCAAAATTGCTACTGGGTGAGGATATGTCTGGTAAAGGAACCGGTGTTTCCTCTGCTTTGGCTCTCTCTAATGCATTCACAAATCTAGCTGCTGCTGTGTTTGGTGAACAAAGAAAACTAGAACCAATGCCACCAGAGAGAAAAGCAAGATGGAGAAAAGAAATTAATTGGCTTCTTTCTGTTACTGATTACATCGTTGAAATGGTTCCATCACATCAAATAAAGGAAGATGGTTCCCAAATGGAGATTATGACGACGAGACAAAGAATTGATCTCCTCATGAACGTACCTGCATTGAAAAAGCTTGATGCTATGCTTATTGATTGTCTGGACAATTTTGAAGGCCAAAGTGAGTTCTATTATGTATCAAAAGATTCAGAGGATGGTGAAAAGAGAAAAGATGAAGATAAGTGGTGGTTGCCCATACCTAAGGTTCCCCCAGAAGGTCTATCTGAAAATGCAAGAAAATTTCTGCAGCATCAGAAAGATAGTGTCAACCAAGTTCTTAAAGCAGCCATGGCCATAAATGCTCAAGTCCTATCAGAAATGGAGATTCCAGAAAATTACATTGAATCCCTTCCAAAGAATGGGAGGGCAAGTCTAGGGGATTCAAACTACAGAAGCATTACAGTAGAATATTTTGATCCTGATCAGTTTCTGGTAACCATGGACCTGTCATCAGAGCATAAAATATTAGACCTCAAGAACAGAATAGAGGCCTCCATAGTGATTTGGAAGAGAAAAATGAACCAGAAAGATGGGAAATCAGCCTGGGGTTCTGCTGTGAGTTTGGAAAAAAGAGAACTTTTTGAAGAGAGAGCAGAAACCATCTTGCTTCTCTTGAAGCAGCGTTTCCCTGGCCTTCCTCAATCTTCTTTAGATATCAGCAAAATCCAGTACAATATGGATATAGGGCAAGCAGTTCTCGAGAGCTATTCAAGAATAATTGAAAGTTTGGCATACACAGTTCTCTCAAGAATAGATGATGTACTCCATGCGGATTATCAAACTCAAAACCCATCAAAGAACGCGAAAAGAAGAAGCATCCGAAAGTCACCGACTCCGAGTCCGACTAAACAAGAGCCAGATATGAATGCAGAAGAAACACCTGTTTCAATGACACTTTCTGATTTCATGGGTTGGGAAGGTGATACAAGAGACTCAGACATGATGAAGAAGGACACTCAAGCTGTTACAGATGACACAAATGGAAAAATGCAGAAACTTCCCAACATAGACACCAATAACAAGACGTCTTACCTCGAGAATTTGGGCGGCGTGAGGAGCCCAACATCACGCCATTAA 1590 0.4075 MVEQEGYMSKLFNFKGRHKKSLSVETGSILESSKEEDPLSSSRSQGTNPLNEESANSDQNGGAPDKPSPTVEEDAAVKAVREKLQQEMEQMKEKFSKLLLGEDMSGKGTGVSSALALSNAFTNLAAAVFGEQRKLEPMPPERKARWRKEINWLLSVTDYIVEMVPSHQIKEDGSQMEIMTTRQRIDLLMNVPALKKLDAMLIDCLDNFEGQSEFYYVSKDSEDGEKRKDEDKWWLPIPKVPPEGLSENARKFLQHQKDSVNQVLKAAMAINAQVLSEMEIPENYIESLPKNGRASLGDSNYRSITVEYFDPDQFLVTMDLSSEHKILDLKNRIEASIVIWKRKMNQKDGKSAWGSAVSLEKRELFEERAETILLLLKQRFPGLPQSSLDISKIQYNMDIGQAVLESYSRIIESLAYTVLSRIDDVLHADYQTQNPSKNAKRRSIRKSPTPSPTKQEPDMNAEETPVSMTLSDFMGWEGDTRDSDMMKKDTQAVTDDTNGKMQKLPNIDTNNKTSYLENLGGVRSPTSRH 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0377 529 MobiDBLite consensus disorder prediction 18 38 - -
Lele38g0377 529 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 31 488 IPR038937 GO:0005085
Lele38g0377 529 MobiDBLite consensus disorder prediction 18 75 - -
Lele38g0377 529 FunFam Rop guanine nucleotide exchange factor 9 279 395 - -
Lele38g0377 529 Gene3D PRONE domain, subdomain 2 279 395 - -
Lele38g0377 529 Coils Coil 74 101 - -
Lele38g0377 529 MobiDBLite consensus disorder prediction 39 64 - -
Lele38g0377 529 MobiDBLite consensus disorder prediction 495 529 - -
Lele38g0377 529 Gene3D PRONE domain, subdomain 1 92 429 - -
Lele38g0377 529 FunFam Rop guanine nucleotide exchange factor 14 311 438 - -
Lele38g0377 529 ProSiteProfiles PRONE domain profile. 78 439 IPR005512 GO:0005085
Lele38g0377 529 MobiDBLite consensus disorder prediction 445 467 - -
Lele38g0377 529 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 86 433 IPR005512 GO:0005085
Lele38g0377 529 MobiDBLite consensus disorder prediction 430 529 - -
Lele38g0377 529 MobiDBLite consensus disorder prediction 477 494 - -
Lele38g0377 529 FunFam Rop guanine nucleotide exchange factor 14 80 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0377 Lele-ChrLele38 3073399 3076468 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0377 38 3073399 3076468 Lele39g1030 39 18963767 18967107 hybridization
Lele38g0377 38 3073399 3076468 Lele40g0353 40 2925542 2928642 hybridization