Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1030 ATGGTGGAGCAGGAAGGTTACATGTCGAAGCTTTTCAATTTCAAAGGGAGGCACAAGAAGAGCTTGAGCCTTGAAACTGGAAGCCTTCTAGAATCTTCAAAAGAGGAAGATTTATTGACTTCAAGAAGCCAAGGAACAAACCCTCCTAACGAAGCGTCTGCTAATTCTGATCAGAATGGATGTGGTCCTGGTAAGCCAAGCCCAAAAGTTGAAGAGGCTGCAGCAGTCAAAGAAATTAGAGAGAAACTACAACAAGAAATGGAACAGATGAAAGAGAAATTTTCAAAACTGCTACTGGGTGAGGATATGTCTGGTAAAGGAACCGGTGTTTCCTCTGCTTTGGCTCTCTCTAATGCATTTACAAATCTAGCTGCTGCCGTGTTTGGGGAACAAAGAAAACTAGAACCAATGCCACCAGAGAGAAAAGCAAGATGGAGGAAAGAAATTAATTGGCTTCTTTCTGTTACTGATTACATCGTTGAAATGGTTCCATCACTTCAAATAAATGAGGATGGTTCCCAAATGGAGATTATGACGACGAGACAAAGAATTGATCTCCTCATGAACGTACCTGCATTGAAAAAGCTTGATGCTATGCTTATTGATTGTCTGGACAATTTTGAAGGCCAAAGTGAGTTCTATTATGTATCAAAAGATTCAGAGGATGGTGAAAAGAGAAAAGATGAAGATAAGTGGTGGTTGCCCATACCTAAGGTTCCCCCAGAAGGTCTATCTGATAACGCAAGAAAATTTCTGCAGCATCAGAAAGATAGTGTCAACCAAGTTCTTAAAGCAGCCATGGCCATAAATGCTCAAGTCCTGTCAGAAATGGAGATTCCAGAAAATTACATTGAATCCCTTCCAAAGAATGGGAGAGCAAGTCTAGGGGATTCAAACTACAGAAGCATTACAGTAGAATATTTTGATCCTGATCAGTTTCTGGTAACCATGGACCTGTCATCAGAACATAAAATATTAGACCTCAAGAACAGAATAGAGGCCTCCATAGTGATTTGGAAGAGAAAAATGAACCAGAAAGATGGGAAATCAGCCTGGGGTTCTGCTGTGAGTTTGGAAAAAAGAGAACTTTTTGAAGAGAGAGCAGAAACCATCTTGCTTCTCTTGAAGCAGCGTTTCCCTGGCCTTCCTCAATCTTCTTTAGATATAAGCAAAATCCAGTACAACATGGATGTAGGGCAAGCAGTTCTTGAGAGCTATTCAAGAATAATTGAAAGTTTGGCATACACAGTTCTCTCAAGAATAGATGATGTACTCCATGCAGATTATCAAACTCAAAACCCATCGAAGAACGCGAAAAAAAGAAGCATTCCCAAGTCACCGAGTCCGAGTCCGAGTCCGACTGAACAAGAGCCGGATGCGAATGCAGAAGAAACACCTGTGTCAATGACACTTTCAGATTTCATGGGTTGGGAAGGTGATACAGGTGACTCAGTTATGAACAAGAACGCTCAAGCTGTTACAGATGACACAGATGGGAAAATGCAGAAACTTCCCAACATTCACACCAACAACAAGACGTCTTACCTTGAGAATTTGGGCGGCGTGAGGAGCCCAACATCACGCCATTGA 1590 0.4164 MVEQEGYMSKLFNFKGRHKKSLSLETGSLLESSKEEDLLTSRSQGTNPPNEASANSDQNGCGPGKPSPKVEEAAAVKEIREKLQQEMEQMKEKFSKLLLGEDMSGKGTGVSSALALSNAFTNLAAAVFGEQRKLEPMPPERKARWRKEINWLLSVTDYIVEMVPSLQINEDGSQMEIMTTRQRIDLLMNVPALKKLDAMLIDCLDNFEGQSEFYYVSKDSEDGEKRKDEDKWWLPIPKVPPEGLSDNARKFLQHQKDSVNQVLKAAMAINAQVLSEMEIPENYIESLPKNGRASLGDSNYRSITVEYFDPDQFLVTMDLSSEHKILDLKNRIEASIVIWKRKMNQKDGKSAWGSAVSLEKRELFEERAETILLLLKQRFPGLPQSSLDISKIQYNMDVGQAVLESYSRIIESLAYTVLSRIDDVLHADYQTQNPSKNAKKRSIPKSPSPSPSPTEQEPDANAEETPVSMTLSDFMGWEGDTGDSVMNKNAQAVTDDTDGKMQKLPNIHTNNKTSYLENLGGVRSPTSRH 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1030 529 MobiDBLite consensus disorder prediction 39 62 - -
Lele39g1030 529 MobiDBLite consensus disorder prediction 20 73 - -
Lele39g1030 529 MobiDBLite consensus disorder prediction 503 529 - -
Lele39g1030 529 Gene3D PRONE domain, subdomain 1 91 428 - -
Lele39g1030 529 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 32 487 IPR038937 GO:0005085
Lele39g1030 529 Coils Coil 69 100 - -
Lele39g1030 529 MobiDBLite consensus disorder prediction 20 38 - -
Lele39g1030 529 FunFam Rop guanine nucleotide exchange factor 14 310 437 - -
Lele39g1030 529 FunFam Rop guanine nucleotide exchange factor 9 278 394 - -
Lele39g1030 529 MobiDBLite consensus disorder prediction 430 445 - -
Lele39g1030 529 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 85 432 IPR005512 GO:0005085
Lele39g1030 529 MobiDBLite consensus disorder prediction 430 529 - -
Lele39g1030 529 ProSiteProfiles PRONE domain profile. 77 438 IPR005512 GO:0005085
Lele39g1030 529 Gene3D PRONE domain, subdomain 2 278 394 - -
Lele39g1030 529 FunFam Rop guanine nucleotide exchange factor 14 79 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1030 Lele-ChrLele39 18963767 18967107 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0398 37 3332488 3335829 Lele39g1030 39 18963767 18967107 hybridization
Lele38g0377 38 3073399 3076468 Lele39g1030 39 18963767 18967107 hybridization