Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0353 ATGGTGGAGCAGGAAGGTTACATGTCGAAGCTTTTCAATTTCAAAGGTAGGCACAAGAAGAGCTTGAGCGTTGAGACTGGAAGCATTCTAGAATCTTCAAAAGAGGAAGATCCATTGTCTTCGTCAAGATGCCAAGGAACAAACCCTCTAAATGAAGAGTCTGCTAATACTGATCAAAATGGAGGTGCTCCTGATAAGCCAAGCCCAAAAGTTGAAGAAGATGCAGCAGTCAAAGAAGTTAGAGAGAAACTACAACAAGAAATGGAACAGATGAAAGAGAAATTTTCAAAACTGCTACTGGGTGAGGATATGTCTGGTAAAGGAACCGGTGTTTCCTCTGCTTTGGCTCTCTCTAATGCATTCACAAATCTAGCTGCTGCTGTGTTTGGTGAACAAAGAAAACTAGAACCAATGCCACCAGAGAGAAAAGCAAGATGGAGAAAAGAAATTAATTGGCTTCTTTCTGTTACTGATTACATCGTTGAAATGGTTCCATCACATCAAATAAAGGAAGATGGTTCCCAAATGGAGATTATGACGACGAGACAAAGAATTGATCTCCTCATGAATGCACCTGCATTGAAAAAGCTTGATGCTATGCTTATTGATGATGATGATCAGGATTGTCTGGACAATTTTGAAGGCCCAAGTGAGTTCTATTATGTATCAAAAGATTCAGAGGATGGTGAAAAGAGAAAAGATGAAGATAAGTGGTGGTTGCCCATACCCAAGGTTCCTCCAGAAGGTCTATCTGAAAATGCAAGAAAATTTCTGCAGCATCAGAAAGATAGTGTCAACCAAGTTCTTAAAGCAGCTATGGCCATAAATGCTCAAGTCCTAGCAGAAATGGAGATTCCAGAAAATTACATTGAATCCCTTCCAAAGAACGGGAGGGCAAGTCTAGGGGATTCAAACTACAGAAGCATTACAGTAGAATATTTTGATCCTGATCAGTTTCTGGTAACCATGGACCTGTCATCAGAGCATAAAATATTAGACCTCAAGAACAGAATAGAGGCCTCCATAGTGATTTGGAAGAGAAAAATGAATCAGAAAGATGGGAAATCAGCCTGGGGTTCTGCTGTGAGTTTGGAAAAAAGAGAACTTTTTGAGGAGAGAGCAGAAACCATCTTGCTTCTCTTGAAGCAACGTTTCCCTGGCCTTCCTCAATCTTCTTTAGATATCAGCAAAATCCAGTACAATATGGATGTAGGGCAAGCAGTTCTCGAGAGCTATTCAAGAATAATTGAAAGTTTGGCATTCACAGTTCTCTCAAGAATAGATGATGTACTCCATGCAGATTATCAAACTCAAAACCCATCAAAGAACGCGAAAAGAAGAAGCATCCGAAAGTCACCGACTCCGAGTCCGATTAAACAAGAGCCGGATGCAGAAGAAACACCTGTTTCAATGACACTTTCAGATTTCATGGGTTGGGAAGGTGATACAAGAGACTCAGACATGATGAAGAAGGACACTCAAGCTATTACAGATGACACAGATGGAAAAATGCAGAAACTTCCCAACATAGACACCAACAACAAGACGTCTTACCTCGAGAACTTGGGCGGCGTGAGGAGCCCGACATCACGCCATTAA 1599 0.4109 MVEQEGYMSKLFNFKGRHKKSLSVETGSILESSKEEDPLSSSRCQGTNPLNEESANTDQNGGAPDKPSPKVEEDAAVKEVREKLQQEMEQMKEKFSKLLLGEDMSGKGTGVSSALALSNAFTNLAAAVFGEQRKLEPMPPERKARWRKEINWLLSVTDYIVEMVPSHQIKEDGSQMEIMTTRQRIDLLMNAPALKKLDAMLIDDDDQDCLDNFEGPSEFYYVSKDSEDGEKRKDEDKWWLPIPKVPPEGLSENARKFLQHQKDSVNQVLKAAMAINAQVLAEMEIPENYIESLPKNGRASLGDSNYRSITVEYFDPDQFLVTMDLSSEHKILDLKNRIEASIVIWKRKMNQKDGKSAWGSAVSLEKRELFEERAETILLLLKQRFPGLPQSSLDISKIQYNMDVGQAVLESYSRIIESLAFTVLSRIDDVLHADYQTQNPSKNAKRRSIRKSPTPSPIKQEPDAEETPVSMTLSDFMGWEGDTRDSDMMKKDTQAITDDTDGKMQKLPNIDTNNKTSYLENLGGVRSPTSRH 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0353 532 MobiDBLite consensus disorder prediction 18 38 - -
Lele40g0353 532 FunFam Rop guanine nucleotide exchange factor 14 316 443 - -
Lele40g0353 532 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 32 491 IPR038937 GO:0005085
Lele40g0353 532 Gene3D PRONE domain, subdomain 2 284 400 - -
Lele40g0353 532 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 86 438 IPR005512 GO:0005085
Lele40g0353 532 MobiDBLite consensus disorder prediction 506 532 - -
Lele40g0353 532 Gene3D PRONE domain, subdomain 1 92 434 - -
Lele40g0353 532 Coils Coil 70 101 - -
Lele40g0353 532 MobiDBLite consensus disorder prediction 438 532 - -
Lele40g0353 532 FunFam Rop guanine nucleotide exchange factor 9 284 400 - -
Lele40g0353 532 ProSiteProfiles PRONE domain profile. 78 444 IPR005512 GO:0005085
Lele40g0353 532 MobiDBLite consensus disorder prediction 18 78 - -
Lele40g0353 532 MobiDBLite consensus disorder prediction 480 499 - -
Lele40g0353 532 FunFam Rop guanine nucleotide exchange factor 14 80 314 - -
Lele40g0353 532 MobiDBLite consensus disorder prediction 39 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0353 Lele-ChrLele40 2925542 2928642 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0398 37 3332488 3335829 Lele40g0353 40 2925542 2928642 hybridization
Lele38g0377 38 3073399 3076468 Lele40g0353 40 2925542 2928642 hybridization