Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0357 ATGGAATCAAGTCGAAGAGCGGTGGAATCTTACTGGAGGTCGCGGTTGATCGATTCTGCAACAACGGATGAAGATAAAGTCACTCCGGTGTATAAATTAGAAGAAGTTTGCGAACTTTTGCGGTCTTCGCGTGTTAGTATTGTGAAGGAACTTTCGGAGTTCATCTTAAAACGACTGGAGCACAAGAGTCCAATTGTAAAGCAGAAGGCTTTAAGATTGATAAAATATGCAGTTGGAAAGTCTGGTGTTGAGTTCAGGAGGGAAATGCAGAGACATTCGGTCACTGTTCGTCAGTTGTTTCACTACAAGGGACATCCGGATCCATTGAAAGGTGATGCTTTAAACAAGGCAGTGCGGGACACTGCTCATGAGGCCATCTCTGCCATCTTTTCTGCAGAAGACAATAAGCCAACACCTGCTGAAGATCTGAACAGGCGGATACAAGGGTTTGGGAATACAAACTTTGAAGTATCATCAGAAGATAAGAAATCCTTTATCAGTGAGGTAGTTGGTCTTGGAAGTGCATCAATCAAGCAAGGACTTAGTAACTTAGCACAGGGACATTCAATTATGAAGAATGAAACTGGAACCTACAAGAGTCCAAATCTTCGAAGGTCATTAACTATAGAAACGGAAGATAGTGGCAGGTATGAACCAGTTACATATCGTAATGAAACTCAAAGTAGCCTTGGACATTCAAAGAATCAATCTATTGGTTCTTGGAACCCGGACTCAAGAGTGGGTAAGATGGAAACAATGAATGATAATTCCAATTCAAGGCATTCAGAGAGTAAGACACGAGAGGATAGGTTGATGGAGACAATTGTAACCTCAGGAGGTGTGCGCCTACAGCCCACTCGAGATGCCCTTCAAGTTTTCCTAACAGAGGCTGCCAAGTTGGATGCCCTGTCTTTAAGTCATGCCCTTGAACTAAAGCTTCAATCTCCAATGTGGCAGGTTCGCATGAAAGCTGTCTGTGTTCTTGAAGCCATCCTCAGGAAAAGGGATGATGATACTTTTTCAAGTGTAGCATCATACTTCACTGAAAATAAAGATTTGGTTGTGAGATGCTCAGAATCTCCCCAATCTTCGTTGAGGGAAAAGGCTAACAAGGTTATTGGTCTTCTTGGTGGCGATCAGCCAAACAGCTCTCCATTGATTTCAGAGAAGCCTGTGAAGGCAGAGGCTGCTACTGTTGCTGTGCTGCCCAACTTGATAGACACTGATGATACCGATGATAATCTTGGAGGGGACGATTTTACAAAGAGTACAATCGATCAGAATGTATCAAATTTGGCACCATCCACGCCTTTGGTTGATGATTTATTTGGAGATTTCAATGGTTCTGTTGAATCAAGTATGGAACAGAAAAATGACGATGACCCCTTTGCTGATGTATCATTTCATACAAACGAAAATAAAGTACAAGCAGATGATCTATTTTCAGGGATGACAGTTGGTGATAAACAGAGTGATAGTTTGCCTCACGGGCTAGGAAGTATTAGTGAGCCTGAAACTTTTGACATTTTGGCTTCCAAATCCACTCAAGCAAACCATGAGCATGTTAGTGATTTAATGTCTGGGTTGTCTGTTAATGAAAATACATTAAGTACAACGCAGAAGACAACATCTTCCACCTCACAACCCGAATCTTTATTATCAGGCTTGAATAGTCAGTTTAGCCGTCAAGCCCCAGATCGTGTCTCAGGCAACATGTTGAACTCTCAAACAGTTGGGTTCAATGCAAATCCCATGTTTCCTACTGGCCATTTGCCATATAATGTGCAGCCTAGTATTATGTTGAACAACACGTATCCTTCTCAACCACTTAATTATAGTGCCATGGGAAATCTTTTGGCTCAGCAGCAGTTCCTGGCAACCATGGCTAATTTCCAGCACCTCAGTAATGTAAGCCTGCAAGATGCAGGCGTTGCTCAGATTGCTGGAACCAGTGGAAGAACGCCAATACCAGACGTATTCCAATCAAATTTTCCTACTCAAACTCCTACCTCAATGATTAATAGTTCGAAGAAAGAAGACACTAAAGCATTTGACTTCATCTCAGACCATATTGCTGCGGCTCGTGATCCTAGGAAAGTGATTTGA 2106 0.4231 MESSRRAVESYWRSRLIDSATTDEDKVTPVYKLEEVCELLRSSRVSIVKELSEFILKRLEHKSPIVKQKALRLIKYAVGKSGVEFRREMQRHSVTVRQLFHYKGHPDPLKGDALNKAVRDTAHEAISAIFSAEDNKPTPAEDLNRRIQGFGNTNFEVSSEDKKSFISEVVGLGSASIKQGLSNLAQGHSIMKNETGTYKSPNLRRSLTIETEDSGRYEPVTYRNETQSSLGHSKNQSIGSWNPDSRVGKMETMNDNSNSRHSESKTREDRLMETIVTSGGVRLQPTRDALQVFLTEAAKLDALSLSHALELKLQSPMWQVRMKAVCVLEAILRKRDDDTFSSVASYFTENKDLVVRCSESPQSSLREKANKVIGLLGGDQPNSSPLISEKPVKAEAATVAVLPNLIDTDDTDDNLGGDDFTKSTIDQNVSNLAPSTPLVDDLFGDFNGSVESSMEQKNDDDPFADVSFHTNENKVQADDLFSGMTVGDKQSDSLPHGLGSISEPETFDILASKSTQANHEHVSDLMSGLSVNENTLSTTQKTTSSTSQPESLLSGLNSQFSRQAPDRVSGNMLNSQTVGFNANPMFPTGHLPYNVQPSIMLNNTYPSQPLNYSAMGNLLAQQQFLATMANFQHLSNVSLQDAGVAQIAGTSGRTPIPDVFQSNFPTQTPTSMINSSKKEDTKAFDFISDHIAAARDPRKVI 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0357 701 SUPERFAMILY ARM repeat 37 385 IPR016024 -
Lele38g0357 701 MobiDBLite consensus disorder prediction 225 267 - -
Lele38g0357 701 Pfam ENTH domain 17 129 IPR013809 -
Lele38g0357 701 PANTHER UNCHARACTERIZED 5 692 IPR039273 -
Lele38g0357 701 CDD ENTH_like_Tepsin 13 131 IPR035802 -
Lele38g0357 701 MobiDBLite consensus disorder prediction 225 255 - -
Lele38g0357 701 MobiDBLite consensus disorder prediction 656 677 - -
Lele38g0357 701 Gene3D - 2 139 IPR008942 -
Lele38g0357 701 SMART VHS_2 13 147 IPR002014 GO:0035091|GO:0043130
Lele38g0357 701 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0357 Lele-ChrLele38 2910753 2915246 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0357 38 2910753 2915246 Lele38g0357 38 2910753 2915246 ECH
Lele38g0357 38 2910753 2915246 Lele39g1050 39 19125649 19129854 hybridization
Lele38g0357 38 2910753 2915246 Lele40g0335 40 2760597 2765027 hybridization