Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1050 ATGGAATCAAGTCGAAGAGCGGTGGAATCTTACTGGAGGTCGCGGTTGATCGATTCTGCAACATCGGATGAAGATAAAGTCACTCCGGTGTATAAATTAGAAGAAATTTGCGAACTTTTGCGGTCTTCGCATGTTATTATTGTAAAGGAACTTTCGGAGTTCATCTTTAAACGACTGGAGCATAAGAGTCCAATTGTAAAGCAGAAGGCTTTAAGATTGATAAAATATGCAGTTGGAAAGTCTGGTGTTGAGTTCAGGAGGGAAATGCAGAGACATTCAGTCGCTGTTCGTCAGTTGTTTCACTACAAGGGACATCCGGATCCATTGAAAGGTGATGCACTAAACAAGGCAGTGCGGGACACTGCTCACGAGGCCATCTCTGCCATCTTTTCTGCAGAAGACAATAAGCCAACACCTGCTGAAGATCTTAACAGGCGGATACAAGGGTTTGGGAATACAAACTTTGAAGTATCATCTGAAGATAAGAAATCCTTTATCAGTGAGGTAGTTGGTCTTGGAAGTGCATCAATCAAGCAAGGACTTAGTAACTTAGCACAGGGACATTCAATTATGAAGAATGAAACTGGAACCTACAAGAGTCCAAATCTTCGTAGGTCATTAACTATAGAAACGGAAGATAGTGGCAGATATGAACCAGTCACATATCGTAATGAAACTCAAAGTAGCCTTGGACATTCAAAGAATCAATCTAGTGGTTCTTGGAACCTGGACTCAAGAGTGGTTAAGATGGAAACATTGAATGATGATTCCAATGCAAGGCATTCAGAGAGTAAGACACGAGAGGATAGGTTGCTGGAGACAATTGTAACCTCAGGAGGTGTACGCCTACAGCCCACTCGAGATGCCCTTCAAGTTTTCCTAACAGAGGCTGCAAAGTTGGATGCCTTGTCTTTAAGTCATGCCCTTGAACTAAAGCTCCAATCTCCAATGTGGCAGGTTCGCATGAAAGCTGTCTGTGTTCTTGAAGCCATCCTCAGGAAAAGGGATGATGATACTTTTTCAAGTGTAGCATCATACTTCACTGAAAATAAAGATGTGGTTGTGAGATGCTCGGAATCTCCCCAATCTTCGCTGAGGGAAAAGGCTAACAAGGTTATTGGTCTTCTTGGTGGTGATCAGCCAAACAGCTCTCCATTTATTTCAGAGAAGCCAGTGAAGGCTGAAGCTGCTACTGTTGCTGAGTTGCCCAACTTGATAGACACTGATGATTCCAATGAGAATCTTGGAGGGGAAGATTTTACAAAGAGTACAATCGATCAGAATTTATCAAATTTGGCACCATCCACACCTTTGGTTGATGATGTATTTGGAGATTTCAATGGTTCTGTTGAATCTAGCATTGAACAGAAAAATGACGATGACCCCTTTGCTGATGTATCATTTCACACAAATGAAAATAAAGGACAAGCAGATGATCTCTTTTCAGGGATGACAGTTGGTGATAAACAGAGTGATAGTTTGACTCATGGGCTGGGAAGTATTAGTGAGCCAGAAACTTTTGACATTTTTGCTTCCAAATCCACTCAAGCAAACCATGAGCATGTTGGTGATTTAATGTCTGGGCTGTCTTTTAATGAAAATGCATCAAGCACAATGCAGAAAACATCTTCCACCTCACAATCCGAATCTTTATTGTCCGGCATGAGTAGTCAGTTTAGCCATCAAACCCCTGATCATGCCTTAGGCAACATGTTGAATGCAAATCCCATGTTTCCTACTGGCCATTTGCCATATAATGTGCAGCCTGGTATTATGTTGAACAACACGTATCCTTCTCAACCACTTAATTATAGTGCCATGAAAAATCTTTTGGCTCAGCAGCAGTTCCTGGCAACCATTGCTAATTTCCAGCACCTCAGTAACGTAAGCATGCAAGATGCAGGCGTTGCTCAGATTGCTGGAACCAGTGGAAGAACGCCAATACCAGACATATTCCAACCAAATTTTCCTACTCAAACTCCTACGTCAATGATTAGTAGTTCGAAGAAAGAAGACACTAAAGCCTTTGATTTCATCTCAGACCATATTGCTGCGGCTCGTGATCCTAGGAAAGTGATTTGA 2082 0.4198 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEICELLRSSHVIIVKELSEFIFKRLEHKSPIVKQKALRLIKYAVGKSGVEFRREMQRHSVAVRQLFHYKGHPDPLKGDALNKAVRDTAHEAISAIFSAEDNKPTPAEDLNRRIQGFGNTNFEVSSEDKKSFISEVVGLGSASIKQGLSNLAQGHSIMKNETGTYKSPNLRRSLTIETEDSGRYEPVTYRNETQSSLGHSKNQSSGSWNLDSRVVKMETLNDDSNARHSESKTREDRLLETIVTSGGVRLQPTRDALQVFLTEAAKLDALSLSHALELKLQSPMWQVRMKAVCVLEAILRKRDDDTFSSVASYFTENKDVVVRCSESPQSSLREKANKVIGLLGGDQPNSSPFISEKPVKAEAATVAELPNLIDTDDSNENLGGEDFTKSTIDQNLSNLAPSTPLVDDVFGDFNGSVESSIEQKNDDDPFADVSFHTNENKGQADDLFSGMTVGDKQSDSLTHGLGSISEPETFDIFASKSTQANHEHVGDLMSGLSFNENASSTMQKTSSTSQSESLLSGMSSQFSHQTPDHALGNMLNANPMFPTGHLPYNVQPGIMLNNTYPSQPLNYSAMKNLLAQQQFLATIANFQHLSNVSMQDAGVAQIAGTSGRTPIPDIFQPNFPTQTPTSMISSSKKEDTKAFDFISDHIAAARDPRKVI 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1050 693 MobiDBLite consensus disorder prediction 535 560 - -
Lele39g1050 693 SUPERFAMILY ARM repeat 35 385 IPR016024 -
Lele39g1050 693 Pfam ENTH domain 16 129 IPR013809 -
Lele39g1050 693 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Lele39g1050 693 CDD ENTH_like_Tepsin 13 131 IPR035802 -
Lele39g1050 693 PANTHER UNCHARACTERIZED 5 684 IPR039273 -
Lele39g1050 693 Gene3D - 2 139 IPR008942 -
Lele39g1050 693 SMART VHS_2 13 147 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1050 Lele-ChrLele39 19125649 19129854 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1050 39 19125649 19129854 Lele39g1050 39 19125649 19129854 ECH
Lele37g0378 37 3171653 3175914 Lele39g1050 39 19125649 19129854 hybridization
Lele38g0357 38 2910753 2915246 Lele39g1050 39 19125649 19129854 hybridization