Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0335 ATGGAATCAAGTCGAAGAGCGGTGGAATCTTACTGGAGGTCGCGGTTGATCGATTCTGCAACATCGGATGAAGATAAAGTCACTCCGGTGTATAAATTAGAAGAAGTTTGCGAACTTTTGCGGTCTTCTCATGTTAGTATTGTGAAGGAACTTTCGGAGTTCATCTTAAAACGACTGGAGCACAAGAGTCCAATTGTAAAGCAGAAGGCTTTAAGATTGATAAAATATGCAGTTGGAAAGTCTGGTGTTGAGTTCAGGAGGGAAATGCAGAGACATTCGGTCACTGTTCGTCAGTTGTTTCACTACAAGGGACATCCGGATCCATTGAAAGGTGATGCTCTAAACAAGGCAGTGCGGGACACTGCTCATGAGGCCATCTCTGCCATCTTTTCTGCAGAAGACAATAAGCCAACACCTGCTGAAGATCTGAACAGGCGGATACAAGGGTTTGGGAATACAAACTCTGAAGTATCATCAGAAGATAAGAAATCCTTTATCAGTGAGGTAGTTGGTCTTGGAAGTGCATCAATCAAGCAAGGACTTAGTAACTTAGCACAGGGACATTCAATTATGAAGAATGAAACTGGAACCTACAAGAGTCCAAATCTTCGAAGGTCATTAACTATAGAAACTGAAGATAGTGGTAGGTATGAATCAGTTACATATCGTAATGAAACACAAAGTAGCCTTGGACATTCAAAGAATCAATCTAGTGGTTCTTGGAACTCGGACTCAAGAGTGGTTAAGATGGAAACATTGAATGTTACTTCCAATGCAAGGCATTCAGAGAGTAAGACGCCAGAGGATAGGTTGATGGAGACAATTGTAACCTCAGGAGGTGTGCGCCTACAGCCCACTCGAGATGCCCTTCAAGTTTTCCTAACAGAGGCTGCGAAGTTGGATGCCCTGTCTTTAAGTCATGCCCTTGAACTAAAGCTTCAATCTCCAATATGGCAGGCACGTCTTTTCAAAGTTTACAATGATTTCTCATTTTTTATGCACAAAAACAAAGAAAGAAAGAAAGAAAAACACTCGTATGGACATGCATGGCCGTATCAATTTCTCAAGCACATTCTTGTTCGCATGAAAGCTGTCTGTGTTCTTGAAGCCATCCTCAGGAAAAGGGATGATGATACTTTTTCAAGTGTAGCATCATACTTCACTGAAAATAAAGATTTGGTTGTGAGATGCTCAGAATCTCCCCAATCTTCGTTGAGGGAAAAGGCTAACAAGGTTATTGGTCTTCTTGGTGACGATCAGCTAAACAGCCCTCCATTTATTTCAGAGAAGCCTGTGAAGGCAGAGGCTGCTACTGTTTCTGTGCTGCCCAACTTGATAGACACTGATGATACCGATGATAATCTTGGAGGGCACGATTTTACAAAGAGTACAATCGATCAGAATGTATCAAATTTGGCAACATCCACGCCTTTGGTTGATGATTTATTTGGAGATTTCAATGGTTCTGTTGAATCTAGTATTGAACAGAAAAATGACGATGACCCCTTCGCTGATGTATCATTTCATACAAATGAAAATAAAGTACAAGCAGATGATCTATTTTCAGGGATGACAGTTGGTGATAAACAGAGTGATAGTTTGACTCACGGGCTAGGAACTATTAGTGAGCCAGAAACTTTTGACATTTTGGCTTCCAAATCCACTCAGGCAAACCATGAGTTTGTTAGTGATTTAATATCTGGGTTGTCTGTTAATGAAAATACATTAAGTACAACGCAGAAGACAACATCTTCCACCTCACAACGCGAATCTTTATTATCAGGCTTGAATAGTCAGGTTAGCCGTCAAGCCCCTGATCATGCCTCAGGCAACATGTTGAACTCTCAAACAGTTGGGTTCAATGAAAATCCCATGTTTCCTACTGGCCATTTGCCATATAATGTGCAGCCTGGTATTATGTTGAACAACACGTATCCTTCTCAACCACTTAATTATAGTGCCATGGGAAATCTTTTGGCTCAGCAGCAGTTCCTGGCCACCATGGCTAATTTCCAGCACCTCAGTAATGCAAGACTGCAAGATGTAGGCGTTGCTCAGATTGCTGGAACCAGTGGAAGAACGTCAATACCAGACATATTCCAATCAAATTTTCCTACTCAAACTCCTACCTCAATGATTAATAGTTCGAAGAAAGAAGACACTAAAGCATTTGACTTCATCTCAGACCATATTGCTGCGGCTCGTGATCCTAGGAAAGTGATTTGA 2226 0.4137 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEVCELLRSSHVSIVKELSEFILKRLEHKSPIVKQKALRLIKYAVGKSGVEFRREMQRHSVTVRQLFHYKGHPDPLKGDALNKAVRDTAHEAISAIFSAEDNKPTPAEDLNRRIQGFGNTNSEVSSEDKKSFISEVVGLGSASIKQGLSNLAQGHSIMKNETGTYKSPNLRRSLTIETEDSGRYESVTYRNETQSSLGHSKNQSSGSWNSDSRVVKMETLNVTSNARHSESKTPEDRLMETIVTSGGVRLQPTRDALQVFLTEAAKLDALSLSHALELKLQSPIWQARLFKVYNDFSFFMHKNKERKKEKHSYGHAWPYQFLKHILVRMKAVCVLEAILRKRDDDTFSSVASYFTENKDLVVRCSESPQSSLREKANKVIGLLGDDQLNSPPFISEKPVKAEAATVSVLPNLIDTDDTDDNLGGHDFTKSTIDQNVSNLATSTPLVDDLFGDFNGSVESSIEQKNDDDPFADVSFHTNENKVQADDLFSGMTVGDKQSDSLTHGLGTISEPETFDILASKSTQANHEFVSDLISGLSVNENTLSTTQKTTSSTSQRESLLSGLNSQVSRQAPDHASGNMLNSQTVGFNENPMFPTGHLPYNVQPGIMLNNTYPSQPLNYSAMGNLLAQQQFLATMANFQHLSNARLQDVGVAQIAGTSGRTSIPDIFQSNFPTQTPTSMINSSKKEDTKAFDFISDHIAAARDPRKVI 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0335 741 PANTHER UNCHARACTERIZED 5 732 IPR039273 -
Lele40g0335 741 MobiDBLite consensus disorder prediction 192 208 - -
Lele40g0335 741 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Lele40g0335 741 SUPERFAMILY ENTH/VHS domain 15 136 IPR008942 -
Lele40g0335 741 MobiDBLite consensus disorder prediction 577 618 - -
Lele40g0335 741 CDD ENTH_like_Tepsin 13 131 IPR035802 -
Lele40g0335 741 Gene3D - 2 139 IPR008942 -
Lele40g0335 741 SMART VHS_2 13 147 IPR002014 GO:0035091|GO:0043130
Lele40g0335 741 MobiDBLite consensus disorder prediction 192 211 - -
Lele40g0335 741 Pfam ENTH domain 16 129 IPR013809 -
Lele40g0335 741 MobiDBLite consensus disorder prediction 223 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0335 Lele-ChrLele40 2760597 2765027 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0335 40 2760597 2765027 Lele40g0335 40 2760597 2765027 ECH
Lele37g0378 37 3171653 3175914 Lele40g0335 40 2760597 2765027 hybridization
Lele38g0357 38 2910753 2915246 Lele40g0335 40 2760597 2765027 hybridization