Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0335 ATGAATACATGGCAAACACGTCTTATGTACATTTCTGCCTTGATATATAGTCAGAGCTTTTGGTTTGATTGTTCCGAGTTAATCCGAATGGGGAGGCTGGTCGTCGGAGCTATAGTCATAGGTACTGCGACGGCGTGTGCCGCAGCGGCTCTTCTGGTGCGCCACCGCATGACGAAATCGAGACGGTGGGTCAGAGCGATGGCCATTTTGCAGGAGCTGGGGGAAAATTGCGCCACTCCCATCGGGAAGCTGAAACAAGTCGCCGATGCAATGACGGTGGAAATGCACGCCGGGCTTGCCTCAGAAGGTGGAAGCAAGCTGAAGATGCTCATCACATATGTTGCTAATCTTCCATCTGGGAATGAGGAAGGATTGTTTTATGCATTGGACCTTGGAGGAACTAACTTCCGTGTGTTGCGAGTGCAACTGGGAGGGAAGGATGGCGGTGTTACTAATCAAGAATTTACTGAGGTGTCAATTCCTACTAGCTTAATGGTTGGGAAATCAGAAGAACTCTTTGACTTTATTGCAGCAGAAGTTGCAAAATTTGTTGCCCATGAAGGTCAAGATTTTCAAGTTCCTCTTGGTAGACAAAGGGAATTAGGTTTTACCTTTTCATTCCCTGTAATGCAAACATCGATTGCTTCTGGAAACCTTATCAAGTGGACAAAAGGCTTCTCCATAGATGATGCGGTTGGCCAGGATGTTGTGGCAGAATTGACAAAAGCCATTGAGAGAAAAGGTCTGGATTTGCGTGTAACGGCTCTGGTCAATGATACAGTTGGGACATTAGCAGGAGGCCGATACAAGAACAAAGATGTCATTGCTGCGGTTATTTTAGGTACTGGAACCAATGCATCATATGTGGAGCGTGCTCAAGCAATACCAAAATGGCATGGTCTTTTGCCGAAATCTGGAGAAATGGTTATTAACATGGAGTGGGGAAACTTCCGTTCATCGCACCTTCCATTGACTGATTATGATATTGCATTAGATGCTGAAAGTTTAAACCCTGATGATCAGATTTTTGAGAAGTTAATTTCTGGTATGTATCTGGGAGAAATTGTCCGCCGAATACTGTGCAAAATGGCTGATGAAGCTTGCTTATTTGGTGATACTGTTCCTCCAAAATTGAAAGTTCAATTTGTACTAAGGACCCCGGATACGCAGGGGATGCACCATGATACATCTGCTGACCTCAATGTGGTTGGGAACACACTGAAGAACGTCTTGGAGATTCCAGATACCTCCCTGATAGTGAGGAAGGTGGTTGTTCAGGTCTGCAACATAGTTGCTACACGTGGTGCTCGTCTTGCAGCTGCTGGCTTCTTGGGAATCTTGAAGAAACTGGGGAGAGACACCCTCGTGGATGGAGAGAATCAGAAGAGCGTGATCGCCATAGATGGTGGATTGTACGAGCATTACACGGCGTACAGAAAGTGCCTGGAGAACACCCTAACTGAATTGCTCGGCGAAGATGTCTCAAAAACTGTTTTCATTGAACACGCGAACGATGGTTCAGGCGTTGGCGCAGCCCTTCTAGCTGCCTCTCATTCACAGTACCTTGATTGA 1572 0.4625 MNTWQTRLMYISALIYSQSFWFDCSELIRMGRLVVGAIVIGTATACAAAALLVRHRMTKSRRWVRAMAILQELGENCATPIGKLKQVADAMTVEMHAGLASEGGSKLKMLITYVANLPSGNEEGLFYALDLGGTNFRVLRVQLGGKDGGVTNQEFTEVSIPTSLMVGKSEELFDFIAAEVAKFVAHEGQDFQVPLGRQRELGFTFSFPVMQTSIASGNLIKWTKGFSIDDAVGQDVVAELTKAIERKGLDLRVTALVNDTVGTLAGGRYKNKDVIAAVILGTGTNASYVERAQAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTDYDIALDAESLNPDDQIFEKLISGMYLGEIVRRILCKMADEACLFGDTVPPKLKVQFVLRTPDTQGMHHDTSADLNVVGNTLKNVLEIPDTSLIVRKVVVQVCNIVATRGARLAAAGFLGILKKLGRDTLVDGENQKSVIAIDGGLYEHYTAYRKCLENTLTELLGEDVSKTVFIEHANDGSGVGAALLAASHSQYLD 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0335 523 Gene3D - 112 515 - -
Lele38g0335 523 CDD NBD_sugar-kinase_HSP70_actin 128 290 - -
Lele38g0335 523 FunFam Phosphotransferase 254 504 - -
Lele38g0335 523 ProSiteProfiles Hexokinase domain profile. 64 516 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Lele38g0335 523 PANTHER HEXOKINASE 29 519 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Lele38g0335 523 SUPERFAMILY Actin-like ATPase domain 273 520 IPR043129 -
Lele38g0335 523 Pfam Hexokinase 70 269 IPR022672 GO:0005524|GO:0005975|GO:0016773
Lele38g0335 523 Gene3D - 90 504 - -
Lele38g0335 523 PRINTS Hexokinase family signature 127 143 - -
Lele38g0335 523 PRINTS Hexokinase family signature 253 269 - -
Lele38g0335 523 PRINTS Hexokinase family signature 501 517 - -
Lele38g0335 523 PRINTS Hexokinase family signature 276 290 - -
Lele38g0335 523 PRINTS Hexokinase family signature 341 363 - -
Lele38g0335 523 PRINTS Hexokinase family signature 424 446 - -
Lele38g0335 523 PRINTS Hexokinase family signature 201 226 - -
Lele38g0335 523 FunFam Phosphotransferase 112 280 - -
Lele38g0335 523 Pfam Hexokinase 276 516 IPR022673 GO:0005524|GO:0005975|GO:0016773
Lele38g0335 523 SUPERFAMILY Actin-like ATPase domain 52 271 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0335 Lele-ChrLele38 2656920 2663754 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0335 38 2656920 2663754 Lele38g0335 38 2656920 2663754 ECH
Lele38g0335 38 2656920 2663754 Lele39g1074 39 19352942 19358229 hybridization
Lele38g0335 38 2656920 2663754 Lele40g0315 40 2534763 2541492 hybridization