Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0315 ATGGCAAACACGTCTTATGTATACATTTCTGCCTTGATATATAGTCAGAGCTTTTGGTTTGATTGTTCTGAGTTAATCCGAATGGGGAGGCTGGTCGTCGGAGCTATAGTTATAGGTGCCGCGACGGCGTGTGCCGCAGCGGCTCTTCTGGTGCGCCACCGGATGACGAAATCGAGACGGTGGACCAGAGCGATGGCCATTTTGCAGGAGCTGGGGGAAAAGTGCGCCACTCCCATCGGGAAGCTGAAACAAGTCGCCGATGCAATGACGGTGGAAATGCACGCCGGGCTTGCCTCAGAAGGTGGAAGCAAGCTGAAGATGCTCATCACATATGTTGCTAATCTTCCATCTGGGAATGAGGAAGGATTATTTTATGCATTGGACCTTGGGGGAACTAACTTCCGTGTGTTGCGAGTGCAACTGGGAGGGAAGGATGGCGGTGTTACTAATCAAGAATTTACGGAGGTGTCAATTCCTACTAGCTTAATGGTTGGGAAATCAGAAGAACTCTTTGACTTTATTGCGGCAGAAGTTGCAAAATTTGTTGCCAATGAAGGTCAAGATTTTCAAGTTCCTCTTGGTAGACAAAGGGAGTTAGGTTTTACCTTTTCATTCCCTGTAATGCAAACATCGATTGCTTCTGGAAACCTTATCAAGTGGACAAAAGGCTTCTCCATAGACGATGCGGTTGGCCAGGATGTTGTGGCAGAATTGACAAAAGCCATTGAGAGAAAAGGTCTGGATTTGCGTGTAACGGCTCTGGTCAATGATACAGTTGGGACATTAGCAGGAGGCCGATACAAGAACAAAGATGTCATTGCTGCGGTTATTTTAGGTACTGGAACCAATGCATCATATGTGGAGCGTGCTCAAGCAATACCAAAATGGCATGGTCTTTTGCCGAAATCTGGAGAAATGGTTATTAACATGGAGTGGGGAAACTTCCGTTCATCGCACCTTCCATTGACTGATTATGATCTTGCACTAGATGCTGAAAGTTTAAACCCTGATGATCAGATTTTTGAGAAGTTAATTTCTGGTATGTATCTGGGAGAAATTGTCCGCCGAATACTGTGCAAAATGGCTGATGAAGCTTTCTTGTTTGGTGATACTGTTCCTCCAAAATTGAAAGTTCAATTTGTACTAAGGACCCCAGATACGCAGGGGATGCACCATGATACATCTGCTGACCTCAATGTGGTTGGGAACACACTGAAGAACGTCTTGGAGATTCCAGATACCTCCCTGGAAGTGAGGAAGGTGGTTGTTCAGGTCTGCAACATAGTTGCTACACGTGGTGCTCGTCTTGCAGCTGCTGGCATCTTGGGAATCTTGAAGAAACTGGGGAGAGACACCCTCGTGGATGGCGAGAATCAGAAGAGCGTCATCGCCATAGATGGTGGATTGTACGAGCATTACACGGCATACAGAAAGTGCCTGGAAAACACCCTAACTGAATTGCTTGGCGAAGATGTCTCGAAAACTGTTTGCATTGAACACGCGAACGATGGTTCAGGCGTTGGCGCAGCCCTTCTAGCTGCCTCTCATTCACAGTACCTTGATTGA 1566 0.4668 MANTSYVYISALIYSQSFWFDCSELIRMGRLVVGAIVIGAATACAAAALLVRHRMTKSRRWTRAMAILQELGEKCATPIGKLKQVADAMTVEMHAGLASEGGSKLKMLITYVANLPSGNEEGLFYALDLGGTNFRVLRVQLGGKDGGVTNQEFTEVSIPTSLMVGKSEELFDFIAAEVAKFVANEGQDFQVPLGRQRELGFTFSFPVMQTSIASGNLIKWTKGFSIDDAVGQDVVAELTKAIERKGLDLRVTALVNDTVGTLAGGRYKNKDVIAAVILGTGTNASYVERAQAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTDYDLALDAESLNPDDQIFEKLISGMYLGEIVRRILCKMADEAFLFGDTVPPKLKVQFVLRTPDTQGMHHDTSADLNVVGNTLKNVLEIPDTSLEVRKVVVQVCNIVATRGARLAAAGILGILKKLGRDTLVDGENQKSVIAIDGGLYEHYTAYRKCLENTLTELLGEDVSKTVCIEHANDGSGVGAALLAASHSQYLD 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0315 521 Gene3D - 110 513 - -
Lele40g0315 521 PANTHER HEXOKINASE 30 517 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Lele40g0315 521 Pfam Hexokinase 68 267 IPR022672 GO:0005524|GO:0005975|GO:0016773
Lele40g0315 521 CDD NBD_sugar-kinase_HSP70_actin 126 288 - -
Lele40g0315 521 Pfam Hexokinase 274 514 IPR022673 GO:0005524|GO:0005975|GO:0016773
Lele40g0315 521 SUPERFAMILY Actin-like ATPase domain 50 269 IPR043129 -
Lele40g0315 521 FunFam Phosphotransferase 110 278 - -
Lele40g0315 521 PRINTS Hexokinase family signature 125 141 - -
Lele40g0315 521 PRINTS Hexokinase family signature 274 288 - -
Lele40g0315 521 PRINTS Hexokinase family signature 422 444 - -
Lele40g0315 521 PRINTS Hexokinase family signature 251 267 - -
Lele40g0315 521 PRINTS Hexokinase family signature 499 515 - -
Lele40g0315 521 PRINTS Hexokinase family signature 199 224 - -
Lele40g0315 521 PRINTS Hexokinase family signature 339 361 - -
Lele40g0315 521 FunFam Phosphotransferase 252 502 - -
Lele40g0315 521 ProSiteProfiles Hexokinase domain profile. 62 514 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Lele40g0315 521 SUPERFAMILY Actin-like ATPase domain 271 518 IPR043129 -
Lele40g0315 521 Gene3D - 88 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0315 Lele-ChrLele40 2534763 2541492 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0315 40 2534763 2541492 Lele40g0315 40 2534763 2541492 ECH
Lele37g0352 37 2922846 2929853 Lele40g0315 40 2534763 2541492 hybridization
Lele38g0335 38 2656920 2663754 Lele40g0315 40 2534763 2541492 hybridization