Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1074 ATGGGGAGGGTGGTCGTTGGAGCTATAGTGATAGGTGCCGCGACGGCGTTTGCCACAGCGGCTCTTCTGGTGCGCCACCGCATGACGAAATCGAGACGGTGGGCCAGAGGGATGGCCATTTTGCAGGAGCTGGAGGAAAAGTGCGCCACTCCCATCGGGAAGCTGAAAAAAGTCGCCGATGCAATGACGGTGGAAATGCACGCCGGGCTTGCCTCAGAAGGAGGAAGCAAGCTCAAGATGCTCATCACATATGTTGATAATCTTCCAACTGGTAATGAGGAAGGATTATTTTATGCATTGGACCTTGGAGGAACTAACTTCCGTGTGTTGCGAGTGCAACTGGGAGGGAAGGATGGCGGTGTTACTAATCAAGAATTTACGGAGGTGTCAATTCCTACTAACTTAATGGTTGGAAAATCAGAAGAACTCTTTGACTTTATTGCAGCAGAAGTTGCAAAATTTGTTGCCAATGAAGGTCAAGATTTTCAAGTTCCTCTCGGTAGACAAAGGGAGTTAGGTTTTACCTTTTCATTCCCTGTAATGCAAACATCAATTGCTTCTGGAAACCTCATCAAGTGGACAAAAGGCTTCTCCATAGATGATGCGGTTGGCCAGGATGTTGTGGCAGAATTGACAAAAGCCATTGAGAGAAAAGGTCTGGATTTGCGTGTAACAGCTCTGGTCAATGATACAGTTGGGACATTAGCAGGAGGCCGATACAAGAACAAAGATGTCATTGCTGCTGTTATTTTAGGTACTGGAACCAATGCATCATATGTGGAGTGCGCTCAAGCGATACCAAAATGGCATGGTCTTTTGTCGAAATCTGGAGACATGGTTATTAACATGGAGTGGGGAAACTTCCATTCGTCGCACCTTCCATTAACTGATTATGATCTTGGATTAGATGCTGAAAGTTTAAACCCTGGTGATCAGATTTTTGAGAAGTTAATTTCTGGTATGTATCTGGGAGAAATTGTCCGGCGAGTACTGTGCAAAATGGCTGATGAAGCTTGCTTATTTGGTGATATTGTTCCTCCAAAATTGAAAGTTCAATTTATACTAAGGACCCCGGATACGCAGGGGATGCACCATGATACATCTGCTGACCTCAATGTAGTTGGAAACACACTGAAGAATGTCTTGGAGATACCAGATACCTCCCTGGAAGTGAGGAAGGTGGTTGTTCAGGTCTGCAACATAGTTGCCACACGTGGTGCTCGTCTTGCAGCTGCTGGCTTCTTGGGAATCTTGAAGAAAATGGGGAGAGACACCCTCGTGGATGGTGAGAATCAAAAGAGTGTGATCGCTACAGATGGTGGATTGTACGAGCATTACACAGCGTACAGAAAGTGCCTTGAGAACACCCTAAGTGAATTGCTCGGTGAAGATGTCTCGAAAACTGTTTGCATTGAACATGCGAACGACGGTTCAGGCATTGGCGCTGCCCTTCTAGCCGCCTCTAATTCGCAGTACCTTGATTGA 1485 0.4613 MGRVVVGAIVIGAATAFATAALLVRHRMTKSRRWARGMAILQELEEKCATPIGKLKKVADAMTVEMHAGLASEGGSKLKMLITYVDNLPTGNEEGLFYALDLGGTNFRVLRVQLGGKDGGVTNQEFTEVSIPTNLMVGKSEELFDFIAAEVAKFVANEGQDFQVPLGRQRELGFTFSFPVMQTSIASGNLIKWTKGFSIDDAVGQDVVAELTKAIERKGLDLRVTALVNDTVGTLAGGRYKNKDVIAAVILGTGTNASYVECAQAIPKWHGLLSKSGDMVINMEWGNFHSSHLPLTDYDLGLDAESLNPGDQIFEKLISGMYLGEIVRRVLCKMADEACLFGDIVPPKLKVQFILRTPDTQGMHHDTSADLNVVGNTLKNVLEIPDTSLEVRKVVVQVCNIVATRGARLAAAGFLGILKKMGRDTLVDGENQKSVIATDGGLYEHYTAYRKCLENTLSELLGEDVSKTVCIEHANDGSGIGAALLAASNSQYLD 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1074 494 Pfam Hexokinase 247 487 IPR022673 GO:0005524|GO:0005975|GO:0016773
Lele39g1074 494 SUPERFAMILY Actin-like ATPase domain 244 491 IPR043129 -
Lele39g1074 494 Gene3D - 83 486 - -
Lele39g1074 494 PRINTS Hexokinase family signature 172 197 - -
Lele39g1074 494 PRINTS Hexokinase family signature 224 240 - -
Lele39g1074 494 PRINTS Hexokinase family signature 312 334 - -
Lele39g1074 494 PRINTS Hexokinase family signature 395 417 - -
Lele39g1074 494 PRINTS Hexokinase family signature 472 488 - -
Lele39g1074 494 PRINTS Hexokinase family signature 247 261 - -
Lele39g1074 494 PRINTS Hexokinase family signature 98 114 - -
Lele39g1074 494 FunFam Phosphotransferase 83 251 - -
Lele39g1074 494 Pfam Hexokinase 41 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Lele39g1074 494 SUPERFAMILY Actin-like ATPase domain 23 242 IPR043129 -
Lele39g1074 494 ProSiteProfiles Hexokinase domain profile. 35 487 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Lele39g1074 494 CDD NBD_sugar-kinase_HSP70_actin 99 261 - -
Lele39g1074 494 FunFam Phosphotransferase 225 475 - -
Lele39g1074 494 Gene3D - 61 475 - -
Lele39g1074 494 PANTHER HEXOKINASE 16 489 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1074 Lele-ChrLele39 19352942 19358229 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1074 39 19352942 19358229 Lele39g1074 39 19352942 19358229 ECH
Lele37g0352 37 2922846 2929853 Lele39g1074 39 19352942 19358229 hybridization
Lele38g0335 38 2656920 2663754 Lele39g1074 39 19352942 19358229 hybridization