Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0297 ATGAGATCTTCCACGTGGCAACGCCAACTTGTTTCTCTGCTCACTACTCCTCTGCCTCTTGTTCTCTCTCCCTCCTTGCCAAGGTGCCCTCTTCTTCTTTATTTCCTCAATACCAAAAAAAAGTCTTGTAACGATGAGAACTGGTATAACAAATACAAATATCCATTTCTGAAGAAGGCAAGTTCATTCTCATCATCATCATCATCTTCATCATCAACCAAACCAAGCAACAATGCTTATGATTATATAATAGTTGGAGGTGGAACTGCAGGCTGCCCTTTGGCTTCAACACTGTCCCAAAAGTTTAGGGTTTTGGTCCTTGAAAGAGGGGGTGTCCCTTTTACAAACCCCAATGTCTCATTTCTGGAGAACTTTCATATCACTTTGGCTGATACTTCGCCATCTTCAGCTTCCCAGTACTTCATTTCAACTGATGGTGTTCTTAATGCCAGAGCTAGGGTTTTGGGAGGTGGTAGCTCCATTAATGCTGGCTTCTACACGAGAGCAAGTTCAAGCCTTCTCGACGCCGGAATCTCTCCTTTCAACGGTTTCACCTTCGATCATATTTATGGCACCAAGGTCGGCGGCACCATCTTCGATCGATTCGGTCGTCGCCACACTGCTGCTGAACTTCTCGCTTCTGCCAACCCTCATAAACTCACCGTTCTCACCTACGCTATCGTCCACAAGATCGTTTTTGACACTCGAGGTAAGGGGCCGAGAGCTGTGGGAGTGATATTCAAAGATGAGAATGGGAAGAGCCATCAGGCGAATCTGGGGAAAGGAAGGGAGAATGAAGTGATAGTGTCTAGTGGTGCAATTGGGACTCCTCAATTGCTTCTGCTAAGTGGGATTGGTCCAAAAGAGCAGCTTCAGGAGTTTAAGATCCCTGTGGTGTTTGATAACCCCTTTGTTGGGAAAGGCATGGCTGATAACCCCATGAACACCATTTTTGTTCCTTCCAATGTACCAGTTTATCAGTCACTCATTGAGACTGTGGGCATTACTAAACGTGGAGTCTACATTGAGGCTAGCTGTGGGTTTAGTCAGTCCAATGATAGCATTCATTGTCACCATGGAATCTTGTCTGCTGAGATTGGCCAGCTCTCCACAATCCCTCCCAAGCAAAGATCCCCAGAAGCTGTTCAAGCTTTTATCAAGAACAAGCGCGATCTCCCAGTTGAAGCATTCAGAGGAGGTTTCATCCTGTCAAAAGTGGCCAACCCTTTGTCTTTTGGTGAGCTCAAGTTAAACAACACAAATGTAGAAGACAACCCTTTGGTCACCTTCAACTATTTCAGTCACCCCTATGATCTCCAACGTTGTGTTCAGGGTATCAGAATAGCCACTAAGGTTGTGCAGTCAGAGCACTTCACAAACTATACCATGTGTTCCAAACAAACCACAGAGCAACTTCTTAACCTCACTGTGAAGGCCAATGTGAACCTCATACCTAAGCATCTAAATGACACACAGTCACTGGAGCAGTTTTGCAGAGACACAGTGATCACAATCTGGCACTACCATGGTGGATGCCACGTGCGGAAGGTGGTTGATTCTGATTATAAGGTTCTTGGAGTTGACAGACTACGTGTGGTGGATGGCTCAACATTTACAGAATCTCCAGGGACTAATCCTCAAGCCACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATTTTGAGAGAGAGATCTCGGAAATCAGCTTAG 1713 0.4565 MRSSTWQRQLVSLLTTPLPLVLSPSLPRCPLLLYFLNTKKKSCNDENWYNKYKYPFLKKASSFSSSSSSSSSTKPSNNAYDYIIVGGGTAGCPLASTLSQKFRVLVLERGGVPFTNPNVSFLENFHITLADTSPSSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSSLLDAGISPFNGFTFDHIYGTKVGGTIFDRFGRRHTAAELLASANPHKLTVLTYAIVHKIVFDTRGKGPRAVGVIFKDENGKSHQANLGKGRENEVIVSSGAIGTPQLLLLSGIGPKEQLQEFKIPVVFDNPFVGKGMADNPMNTIFVPSNVPVYQSLIETVGITKRGVYIEASCGFSQSNDSIHCHHGILSAEIGQLSTIPPKQRSPEAVQAFIKNKRDLPVEAFRGGFILSKVANPLSFGELKLNNTNVEDNPLVTFNYFSHPYDLQRCVQGIRIATKVVQSEHFTNYTMCSKQTTEQLLNLTVKANVNLIPKHLNDTQSLEQFCRDTVITIWHYHGGCHVRKVVDSDYKVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRERSRKSA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0297 570 PIRSF Alcohol_oxidase 55 177 IPR012132 GO:0050660
Lele38g0297 570 PIRSF Alcohol_oxidase 170 570 IPR012132 GO:0050660
Lele38g0297 570 ProSitePatterns GMC oxidoreductases signature 1. 152 175 IPR000172 GO:0016614|GO:0050660
Lele38g0297 570 Pfam GMC oxidoreductase 409 555 IPR007867 GO:0016614
Lele38g0297 570 ProSitePatterns GMC oxidoreductases signature 2. 272 286 IPR000172 GO:0016614|GO:0050660
Lele38g0297 570 Pfam GMC oxidoreductase 80 175 IPR000172 GO:0016614|GO:0050660
Lele38g0297 570 Pfam GMC oxidoreductase 204 313 IPR000172 GO:0016614|GO:0050660
Lele38g0297 570 SUPERFAMILY FAD/NAD(P)-binding domain 75 564 IPR036188 -
Lele38g0297 570 Gene3D - 466 570 IPR036188 -
Lele38g0297 570 Gene3D - 62 390 IPR036188 -
Lele38g0297 570 SUPERFAMILY FAD-linked reductases, C-terminal domain 309 511 - -
Lele38g0297 570 PANTHER OSJNBA0019K04.7 PROTEIN 172 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0297 Lele-ChrLele38 2327962 2335309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0297 70 566 Miscellaneous Gene Families AT5G51950 50.738 3.93e-175 506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0297 38 2327962 2335309 Lele39g1110 39 19661132 19666197 hybridization
Lele38g0297 38 2327962 2335309 Lele40g0279 40 2225451 2231403 hybridization