Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1110 ATGGCTTTTGTTTCAGCAGTCAACTTGTTCGCCTGCGTGTTACTCTTCTGCCTCTTCTTCTCTTTCCCTCCTTGCCAAGGTAACAATCAGAAGTGGTATAACAAATACAGATACCCGTTTCTGAAGAAGGCAAGTTCATTCTCATCATCATCATCATCAACTTCAACCATACCAAGCAACAATGCTTATGATTATATAATAGTTGGAGGTGGAACTGCAGGCTGCCCTTTGGCTTCAACACTTTCCCAAAACTTTAGGGTTTTGGTTCTTGAAAGAGGGGGTGTCCCTTTCACAAACCCTAATGTGTCATTTCTGGAGAATTTTCATATCACTTTAGCTGATACTTCACCATCTTCAGCTTCCCAGTACTTCATTTCCACTGATGGTGTTCTTAATGCCAGAGCTAGGGTTTTGGGAGGTGGTAGTTCCATTAATGCTGGCTTTTACACCCGAGCAAGCTCAAGGTTTATAAAGAGAGTGGGGTGGGATGTGAAGGTGGTGAACGAGTCATACGGGTGGGTAGAGAAGCAAATAGTTCACCGGCCCAAGTTCTCTGCGTTTCAGAGAGCTGTAAGGGACAGCCTTCTCGACGCCGGAATCTCTCCTTTCAACGGTTTCACCTTCGATCATATTTATGGCACCAAGGTCGGTGGCACCATCTTCGATCGCTTCGGTCGTCGCCACACCGCTGCTGAACTTCTCGCTTCTGCCAACCCTCATAAACTCACCATTCTCACCTACGCCACCGTCCACAAAATCGTTTTTGATACTCGAGGTAAGAGGCCAAGAGCTGTGGGAGTGATATTCAAAGATGAGAATGGGAAGAGCCATCAGGCAAATCTGGGGAAGGGAAGGGAGAGTGAAGTGATAGTGTCTAGTGGTGCGATTGGGACTCCTCAAGTGCTTCTGCTAAGTGGGATTGGCCCAAAAGAGCAGCTTCAGGAGTTTAAGATCCCTGTGGTGTTTGCTAACCCCTTTGTTGGGAAAGGCATGGCTGATAATCCCATGAACACCATTTTTGTTCCTTCCAATAGACCAGTTTATCAGTCACTCATTGAGACTGTGGGCATTACTAAACGTGGAGTCTACATTGAGGCTAGCTGTGGGTTTAGTCAGTCCAATGATAGCATTCACTGTCACCATGGAATCTTGTCTGCTGAGATTGGCCAGCTCTCCACAATCCCTCCCAAGCAAAGGTCCCCAGAAGCTGTTCAAGCTTTTATCAAGAACAAGCGCGATCTCCCGGTTGAAGCATTCAGGGGAGGTTTCATCTTGTCAAAAGTGGCCAATCCTTTGTCTTTAGGTGAGCTCAAGTTAAACAACACCAATGTAGAAGATAACCCTTTGGTCACCTTCAACTATTTCAGTCACCCCTATGATCTCCAACGTTGCGTTGAGGGTATCAGAATAGCCACTAAGGTTGTGCAGTCAGAGCACTTCACAAACTACACCACCTGTTCCAAACAAACTACAGAGCAACTTCTTAACCTCACTGTGAAGGCCAATGTGAACCTCATACCAAAGCATCTAAATGACACACAGTCACTGGAGCAGTTTTGCAGAGACACAGTGATCACAATCTGGCACTACCATGGTGGATGCCACGTGGGGAAGGTGGTTGATTCTGATTATAGGGTCCTTGGAGTTGACAGACTACGTGTGGTGGATGGCTCAACATTTACAGAATCACCAGGGACTAATCCTCAAGCCACTGTTATGATGATGGGCAGGTACATGGGACTGAAGATTTTGAGAGAGAGGTCGGGGAAATCAGCTCAGGGAAGAATACTGTAG 1794 0.4649 MAFVSAVNLFACVLLFCLFFSFPPCQGNNQKWYNKYRYPFLKKASSFSSSSSSTSTIPSNNAYDYIIVGGGTAGCPLASTLSQNFRVLVLERGGVPFTNPNVSFLENFHITLADTSPSSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSRFIKRVGWDVKVVNESYGWVEKQIVHRPKFSAFQRAVRDSLLDAGISPFNGFTFDHIYGTKVGGTIFDRFGRRHTAAELLASANPHKLTILTYATVHKIVFDTRGKRPRAVGVIFKDENGKSHQANLGKGRESEVIVSSGAIGTPQVLLLSGIGPKEQLQEFKIPVVFANPFVGKGMADNPMNTIFVPSNRPVYQSLIETVGITKRGVYIEASCGFSQSNDSIHCHHGILSAEIGQLSTIPPKQRSPEAVQAFIKNKRDLPVEAFRGGFILSKVANPLSLGELKLNNTNVEDNPLVTFNYFSHPYDLQRCVEGIRIATKVVQSEHFTNYTTCSKQTTEQLLNLTVKANVNLIPKHLNDTQSLEQFCRDTVITIWHYHGGCHVGKVVDSDYRVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRERSGKSAQGRIL 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1110 597 SUPERFAMILY FAD-linked reductases, C-terminal domain 331 533 - -
Lele39g1110 597 PIRSF Alcohol_oxidase 38 594 IPR012132 GO:0050660
Lele39g1110 597 PANTHER OSJNBA0019K04.7 PROTEIN 14 587 - -
Lele39g1110 597 Pfam GMC oxidoreductase 431 577 IPR007867 GO:0016614
Lele39g1110 597 ProSitePatterns GMC oxidoreductases signature 2. 294 308 IPR000172 GO:0016614|GO:0050660
Lele39g1110 597 Gene3D - 180 526 - -
Lele39g1110 597 Gene3D - 63 576 IPR036188 -
Lele39g1110 597 Pfam GMC oxidoreductase 63 335 IPR000172 GO:0016614|GO:0050660
Lele39g1110 597 SUPERFAMILY FAD/NAD(P)-binding domain 60 586 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1110 Lele-ChrLele39 19661132 19666197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g1110 43 588 Miscellaneous Gene Families AT5G51950 52.899 0.0 560
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0313 37 2611122 2616150 Lele39g1110 39 19661132 19666197 hybridization
Lele38g0297 38 2327962 2335309 Lele39g1110 39 19661132 19666197 hybridization