Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0279 ATGGCTTCTGTTTCTGCAGCCAACTTGTTCCCCTGCTCATTACTCCTCTGCCTCTTGTTCTCTCTCCCTCCTTGCCAAGGTAACAATGAGAACTGGTATAACAAATACAAATATCCATTTCTGAAGAAAGCAAGTTCATTCTCATCGTCATCATCAACCCCACCAAGCAACAATGCTTATGATTATATAATAGTTGGAGGTGGAACAGCAGGCTGCCCTTTGGCTTCAACACTGTCCCAAAAGTTTAGGGTTTTGGTTCTTGAAAGAGGGGGTGTCCCTTTTACAAACCCCAATGTCTCATTTCTGGAGAACTTTCATATCACTTTGGCTGATACTTCACCATCTTCAGCTTCCCAGTACTTCATTTCAACTGATGGTGTTCTTAATGCCAGAGCTAGGGTTTTGGGAGGTGGGAGCTCCATTAATGCTGGCTTCTACACCAGAGCAGGCTCAAGGTTTATAAAGAGAGTGGGGTGGGATGCGAAGGTGGTGAACGAGTCATTCGAGTGGGTAGAGAAGCAAATAGTTCACCGGCCGAAGTTCTCTGCGTTTCAGAGAGCTGTAAGGGACAGCCTTCTCGACGCCGGAATCTCTCCTTTCAACGGTTTCACCTTCGATCATATTTATGGCACCAAGGTGGGCGGCACCATCTTCGACCGATTCGGTCGTCGCCACACTGCTGCTGAACTTCTCGCTTCTGCCAACCCTCATAAACTCACCGTTCTCACCTACGCCACCGTCCACAAAATAGTTTTTGATACTCGAGGTAAGAGGCCGAGCGCTGTGGGAGTGATATTCAAAGATGAGAATGGGAAGAGTCATCAGGCGAATCTGGGGAAAGGAAGGGACAATGAAGTGATAGTGACTAGTGGTGCAATTGGGACTCCTCAATTGCTTCTGCTAAGTGGGATTGGTCCAAAAGAGCAGCTTCAGGAGTTTAAGATCCCTGTGGTGTTTGATAACCCCTTTGTTGGGAAAGGCATGGCTGATAACCCCATGAACACCATTTTTGTTCCTTCCAATGTACCAGTTTATCAATCACTCATTGAGACTGTGGGCATTACTAAACGTGGAGTCTACATTGAGGCTAGCTGTGGGTTTAGTCAGTCCAATGATAGCATTCACTGTCACCATGGAATCTTGTCTGCTGAGATTGGCCAGCTCTCCACAATCCCTCCCAAGCAAAGATCCCCAGAAGCTGTTCAAGCTTTTATCAAGAACAAGCGCGATCTCCCAGTTGAAGCATTCAGAGGAGGTTTCATCCTGTCAAAAGTGGCCAACCCTTTGTCTTTTGGTGAGCTCAAGTTAAACAACACAAATGTAGAAGACAACCCTTTGGTCACCTTCAACTATTTCAGTCACCCCTATGATCTCCAACGTTGTGTTCAGGGTATCCGAATAGCCACTAAAGTTGTGCAGTCAGAGCACTTCACAAACTACACCATGTGTTCCAAACAAACCACAGAGCAACTTCTTAACCTCACTGTGAAGGCCAATGTGAACCTCATACCTAAGCATCTAAATGACTCACAGTCACTGGAGCAGTTTTGCAGAGACACAGTGATCACAATCTGGCACTACCATGGTGGATGCCACGTGCGGAAGGTGGTTGATTCTGATTATAAGGTTCTTGGAGTTGACAGACTACGTGTGGTGGATGGCTCAACATTTACAGAATCTCCAGGGACTAATCCTCAAGCCACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATTTTGAGAGAGAGATCGCGGAAATCAGCTTAG 1770 0.465 MASVSAANLFPCSLLLCLLFSLPPCQGNNENWYNKYKYPFLKKASSFSSSSSTPPSNNAYDYIIVGGGTAGCPLASTLSQKFRVLVLERGGVPFTNPNVSFLENFHITLADTSPSSASQYFISTDGVLNARARVLGGGSSINAGFYTRAGSRFIKRVGWDAKVVNESFEWVEKQIVHRPKFSAFQRAVRDSLLDAGISPFNGFTFDHIYGTKVGGTIFDRFGRRHTAAELLASANPHKLTVLTYATVHKIVFDTRGKRPSAVGVIFKDENGKSHQANLGKGRDNEVIVTSGAIGTPQLLLLSGIGPKEQLQEFKIPVVFDNPFVGKGMADNPMNTIFVPSNVPVYQSLIETVGITKRGVYIEASCGFSQSNDSIHCHHGILSAEIGQLSTIPPKQRSPEAVQAFIKNKRDLPVEAFRGGFILSKVANPLSFGELKLNNTNVEDNPLVTFNYFSHPYDLQRCVQGIRIATKVVQSEHFTNYTMCSKQTTEQLLNLTVKANVNLIPKHLNDSQSLEQFCRDTVITIWHYHGGCHVRKVVDSDYKVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRERSRKSA 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0279 589 Gene3D - 177 523 - -
Lele40g0279 589 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 530 - -
Lele40g0279 589 PANTHER OSJNBA0019K04.7 PROTEIN 21 585 - -
Lele40g0279 589 Pfam GMC oxidoreductase 428 574 IPR007867 GO:0016614
Lele40g0279 589 SUPERFAMILY FAD/NAD(P)-binding domain 53 584 IPR036188 -
Lele40g0279 589 PIRSF Alcohol_oxidase 39 589 IPR012132 GO:0050660
Lele40g0279 589 Gene3D - 60 573 IPR036188 -
Lele40g0279 589 Pfam GMC oxidoreductase 60 332 IPR000172 GO:0016614|GO:0050660
Lele40g0279 589 ProSitePatterns GMC oxidoreductases signature 2. 291 305 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0279 Lele-ChrLele40 2225451 2231403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0279 46 585 Miscellaneous Gene Families AT5G51950 53.114 0.0 563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0313 37 2611122 2616150 Lele40g0279 40 2225451 2231403 hybridization
Lele38g0297 38 2327962 2335309 Lele40g0279 40 2225451 2231403 hybridization