Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0250 ATGGTGTCTGGTTCGAGAATGGATGGAAGTACACAGGCACTTCCTTCCAGATTGCGCAAAACCATCCAATCGATCAAAGAAATTGTAGGTAACCATTCTGATGCTGATATTTATGCTGCCCTTAAGGAAGCCAACATGGATCCTAATGAAACCACCCAGACACTGCTCAACCAAGATCCATTCCATGAAGTGAAGAGAAGAAGAGACAGAAAGAAAGAGCCGCAAAGTGTTGGATACAAGGGTACATCTGAACCGCAAAGACGTACTGACAATAATGGTTACAGAATGAAGTTTCATGCTCCGTCTGAACGAGCTTCTCAAAGAATAAACTATTCTCGAAATACTTTACCTGGTAAACTTTATATTTCACTTTTTGGCATCAGCAGAGAGTTTCGTGTTGTTAGAGATAACAGAGCAAATCATATATATAAAGAAGTGAAGCCTCCTTCGGTTCAATGTTCAACATCCACCAATGAGCAATTAACTTCATCCGAAAAAGGGATTTCACTTTATAAGGAAGTTATTTGTGCCTTAATTCTGTATTATATTTGTGACAGATCATCAGCAGATTCCAGCAATCAAAAGTCATCTGTTTCGAGAAAATCATCTCATATTCCAAATGGTCCTTCTGAATCACATACTAGGTACTCAGGTGATAGTGTTTCTAATGCCATTGACAGACAAGGTTCATCTAAGGAGAAGCTAGTTATGACTCCAAATAGTGCACTGCAGTCGCAACCAGTTAAGCCCAGCAATGTCCATCAAAATTCTATGACAGTGGCATCATCTAGTTCTGCTGTTGGAGTATACTCTTCTTCTACAGATCCAGTTCATGTGCCTTCTCCTGATTCCAGATCATCAGGTGCTGTTGGAGCCATTGGGCGTGAAGTAGGGGTTGTTGGTGTTCGCCGACATTCTTTAGACAACTCATTGAAACAATCATCTGTTCCTATATCGCAGCACAACAAAGAGTGGAAACCTAAAGCAAGCCAGAAACTAAATGTTAGTGGTCCTGGAGTGATTGGAGCACCTAAAAATTCTGTTTCACCCGCTGAAAAATCTGAAGATGTAGAATCAGACACAGCAAAGCTTCAAGATGAACTTTCACAAGTAAATATATTTGAGAGCCAAAATGTGATCATAGCGAAGCATATTCGTGTTCCAGAGACTGATCGTTGTCAGTTGACTTTTGGGACCATCGGGACCGGAGTGGATCCTTCTAGGCATCAGTCTAATTGTCTACCAATAGGAACTGCTGAAAAATCAAATGAGGAGTCTGTAGCAAGCATGTCAGTACTGGCTCTGAAGTTGACCAACGATGTTTCTGGAAGCAAGCAGGTGGACTTACAGGATGACCACATTCAAAGTACTGGATCGGACTCACCATCATCTGTTGCTGCTGCTGCTGCTGAGCAACAATTACCAGACAACAATGAATCTTCAAGACCTCACAATCTCGACAATTATGCGGATATTGGGCTGGTGCACGATAATAGAATGTCTTATACACCTTCAGAATCACAGCAACAGCAGGATTCACATGATATCCCAGGCTTCTCGGTACGTGTTTTCTTTCTGTTTTATCCGACAGATTGGTTGATCAATGAAATTCCCTGTAATGCATATGATCCCCCGACCGGGTATGACATATCCTATTTGAGACACACTACAGATGAAACTGTACGAGTGCAGGGTCTGCCATCTGCTCAGGAGGGTTATGGCTCCCATAATTCCAATAATATTTCTAACTCCACAATTCCCGTGGTGCAACAACCTCCAGTGTCACAGATGTATCCGCAAGTTCATGTTTCACATTTCTCTAATCTTATGCCGTTTCGTCAGTTTCTATCTCCCGTATACGTTCCACCAATGCCCATGCCTGGATATTCAAGCAATCCTCCTTACCCTCATCCATCAAATGGCAGTAGTTACTTGTTGATGCCTGGAGGCGGTTCTCATCTTAATGCCAACAGCATTAAATATGGGGTTCAGCCATTCAAGCCTGTTCCTTCTGGCAGTCCTACTGGGTTTGGAAATTTTGCAAATCCAACTGGATATGCCATGAATGCCCCTGGTATGGTTGGAGGTGCAACTGCTCTAGAAGATTCATCTCGCATCAAATACAAAGATAATCTTTATGTCCCAAATCCGCAGGCTGAGACATCAGAAATCTGGATACAGAACCCAAGGGAGCTTCCCAGCATGCAATCTCCTCAATATTACAACATGCCAGGCCAAACACCGCATCATGCGGCATACATGCTGTCTCATGCCGGCCATGCCTCTTTCAATGCAGCAGCGGCACAATCCTCTCACATGCAGTTCCCTGGAATGTACCATGCTTCACCGCAGCCGGCTGCCATGGCTAGCCCTCATCACCATTTAGGACCAGCTATGGGCAACAATGTTGGAGTTGGAGTGGCTGCAGCCTCCCCCGGGGCTCAGGTCGGTGCATATCAACAACCCCAAATGGGTCACCTCAATTGGACGACAAATTTCTGA 2502 0.4388 MVSGSRMDGSTQALPSRLRKTIQSIKEIVGNHSDADIYAALKEANMDPNETTQTLLNQDPFHEVKRRRDRKKEPQSVGYKGTSEPQRRTDNNGYRMKFHAPSERASQRINYSRNTLPGKLYISLFGISREFRVVRDNRANHIYKEVKPPSVQCSTSTNEQLTSSEKGISLYKEVICALILYYICDRSSADSSNQKSSVSRKSSHIPNGPSESHTRYSGDSVSNAIDRQGSSKEKLVMTPNSALQSQPVKPSNVHQNSMTVASSSSAVGVYSSSTDPVHVPSPDSRSSGAVGAIGREVGVVGVRRHSLDNSLKQSSVPISQHNKEWKPKASQKLNVSGPGVIGAPKNSVSPAEKSEDVESDTAKLQDELSQVNIFESQNVIIAKHIRVPETDRCQLTFGTIGTGVDPSRHQSNCLPIGTAEKSNEESVASMSVLALKLTNDVSGSKQVDLQDDHIQSTGSDSPSSVAAAAAEQQLPDNNESSRPHNLDNYADIGLVHDNRMSYTPSESQQQQDSHDIPGFSVRVFFLFYPTDWLINEIPCNAYDPPTGYDISYLRHTTDETVRVQGLPSAQEGYGSHNSNNISNSTIPVVQQPPVSQMYPQVHVSHFSNLMPFRQFLSPVYVPPMPMPGYSSNPPYPHPSNGSSYLLMPGGGSHLNANSIKYGVQPFKPVPSGSPTGFGNFANPTGYAMNAPGMVGGATALEDSSRIKYKDNLYVPNPQAETSEIWIQNPRELPSMQSPQYYNMPGQTPHHAAYMLSHAGHASFNAAAAQSSHMQFPGMYHASPQPAAMASPHHHLGPAMGNNVGVGVAAASPGAQVGAYQQPQMGHLNWTTNF 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0250 833 Pfam GBF-interacting protein 1 N-terminal 15 73 IPR009719 -
Lele38g0250 833 MobiDBLite consensus disorder prediction 452 488 - -
Lele38g0250 833 MobiDBLite consensus disorder prediction 268 290 - -
Lele38g0250 833 SUPERFAMILY UBA-like 15 75 IPR009060 GO:0005515
Lele38g0250 833 MobiDBLite consensus disorder prediction 50 94 - -
Lele38g0250 833 MobiDBLite consensus disorder prediction 308 357 - -
Lele38g0250 833 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 319 833 - -
Lele38g0250 833 MobiDBLite consensus disorder prediction 452 485 - -
Lele38g0250 833 MobiDBLite consensus disorder prediction 60 77 - -
Lele38g0250 833 MobiDBLite consensus disorder prediction 191 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0250 Lele-ChrLele38 1984402 1989998 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0250 38 1984402 1989998 Lele38g0250 38 1984402 1989998 ECH
Lele38g0250 38 1984402 1989998 Lele39g1174 39 20415418 20420873 hybridization
Lele38g0250 38 1984402 1989998 Lele40g0234 40 1851955 1857420 hybridization