Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0234 ATGGTGTCTGGCTCGAGAATGGATGTTAGTACACAGGCACTTCCTTTTAGACTGCGCAAAACCATCCAATCGATCAAAGAAATTGTAGGTAACCATTCTGATGCTGATATTTATGCGGCCCTTAAAGAAGCCGACATGGATCCTAATGAAACCACCCAGACACTGCTCAACCAAGGTGGGGCACGATGTTTTTGGTTGATTTTTCAAGTTCCAAGTGTTGTATACAAGGATACATCTGAACCGCAAAGACGCACTGACAATAATGGTCGCGTAATGAAGTTTCATGCTCCATCTGAACGTGCTTCTCAAAGAATAAACTATTCTCGAAATACTTTACCTGGTAAACTTTATATTTCACTTTTTGGCATCAGCAGAGAGTTTCGTGTTGTTAGAGATAACAGAGCAAATCATATATATAAAGAAGTGAAGCCTCCTTCGGTTCAATGTTCAACATCCACCAATGAGCAATTAACTTCATCCGAAAAAGGGATTTCACTTTATAAGGAAGTTATTTGTGCCTTAACTCTGTATTATATTTGTGACAGATCATCAGCAGATTCCAGCGATCAAAAGTCATCTGTTGCTAGAAAATCATCTCATGTTCCAAATGGTCCTTATGAATCACATACGAGGTACTCAGGTGATACTGTTTCTAATGCCATTGACAGACAAGGTTCATCTGAGGAGAATCTAGTTATGACTCCAAATACCGCACTGCAGTCTCAACCAGTTAAGCCCAGCAATGTCCATCAAAATTCTGTGACAGTGGCATCATCTAGTTCTGCTGTTGGAGTATACTCTTCTTCTACAGATCCAGTTCATGTGCCTTCTCCTGATTCCAGATCATCTGGTGCTGTTGGAGCCATTGGGCGTGAAGTAGGGGTTGTTGGTGTTCGCCGACATTCTTCTGACAACTCATTGAAACAATCACCTGTTCCTATTAGCAGATCATTCTTGAACAATCAGTATAACAATAGGCAACATCAACAATCTGCGGGACATCAGGGAGTATCGCAGCACAACAAAGAGTGGAAACCTAAAGTAAGCCAGAAACTAAATGTTAGTGATCCTGGAGTGATTGGAGCAACTAAAAAATCTATTTCACCTGCTGAAAAATCTGAAGATGTAGAATCAAACACAGCAAAGATTCAACATGAAATTTCACGAGTAAATATATTTGAGAGCCAAAATGTGATCATAGCGAAGCATATTCGTGTTCCAGAGACTGATCGTTGTCAGTTGACTTTTGGGACCATCGGGACCGGAGTTGATCCTTCTAGGCATCAGTCTAATTGTCTACCAATAGGAACTGCTGAAAAATCAAATGAGGAGTCTGTAACAAGCATGTCAGTACTGGCTCCAAAGTTGACCAGCGATGTTTCTGGAAGCAAGCAGGTGGACTTACAAGATGACCACATTCAAAGTACTGGATCGGACTCACCAGCATCTGTTGCTGCTGCTGCTGCTGAGCAACAATTAGCAGACAACAATGAATCTTCAAGACCTCACAATCTTGACAGTTATGCGGATATTGGGCTGGTACACGATAATAGCATGTCTTATACACCTTCAGAATCACAGCAACAGCAGGATTCACATGATATCCCGGGCTTCTCGGTGAGTGTTTTCTTTCTGGTTTATCCGACAGATTGGTTGATCAATGAAATTCCCTGTAATGCGTATGATCCACCGGCCGGGTATGACATGTCCTATTTGAGACAGACTACAGATGAAACTGTACGAGGGCAGGGTCTGCCATCTGCTCAGGAGGGTTATGGCTCCCATAATTCCAATAATATTTCTAACTCCACAATTCCCATGGTGCAACAACCTCCAGTGTCACAGATGTATCCGCAAGTTCATGTCTCACATTTCTCTAATCTTATGCCGTTTCGTCAGTTTCTATCTCCTGTATACGTTCCACCAATGCCCATGCCTGGATATTCAAGCAATCCTCCTTACCCTCATCCATCAAATGGTAGTAGTTACTTGTTGATGCCTGGAGGCGGCTCTCATCTTAATGCCAACAGCATTAAATATGGGGTTCAGCCATTCAAGCCTGTTCCTTCTGGCAGTCCTACTGGGTTTGGAAATTTTGCAAATCCAACTGGATATGCCATGAATGCCCCAGGTATGGTTGGAGGTGCAACTGCTCTAGAAGATTCATCTCGCATCAAATACAAAGATAATCTTTATGTCCCAAATCCGCAGGCTGAGACATCAGAAATCTGGATACAGAACCCAAGGGAGCTTCCCAGCATGCAATCTCCTCAATACTACAACATGCCAGGCCAAACCTCTCATCATGCGGCATACATGCTGTCTCATGCTGGCCATGCCTCTTTCAATGCAGCGGCGGCACAATCCTCTCACATGCAGTTCCCTGGAATGTACCATGCTTCACCGCAGCCGGCTGCCATGGCTAGCCCTCATCACCATTTAGGACCAGCTATGGGCAACAATGTTGGAGTTGGAGTGGCTGCAGCCTCGCCCGGGGCTCAGGTCGGGGCATATCAGCAACCCCAAATGGGTCACCTCAATTGGACGACAAATTTCTGA 2559 0.4396 MVSGSRMDVSTQALPFRLRKTIQSIKEIVGNHSDADIYAALKEADMDPNETTQTLLNQGGARCFWLIFQVPSVVYKDTSEPQRRTDNNGRVMKFHAPSERASQRINYSRNTLPGKLYISLFGISREFRVVRDNRANHIYKEVKPPSVQCSTSTNEQLTSSEKGISLYKEVICALTLYYICDRSSADSSDQKSSVARKSSHVPNGPYESHTRYSGDTVSNAIDRQGSSEENLVMTPNTALQSQPVKPSNVHQNSVTVASSSSAVGVYSSSTDPVHVPSPDSRSSGAVGAIGREVGVVGVRRHSSDNSLKQSPVPISRSFLNNQYNNRQHQQSAGHQGVSQHNKEWKPKVSQKLNVSDPGVIGATKKSISPAEKSEDVESNTAKIQHEISRVNIFESQNVIIAKHIRVPETDRCQLTFGTIGTGVDPSRHQSNCLPIGTAEKSNEESVTSMSVLAPKLTSDVSGSKQVDLQDDHIQSTGSDSPASVAAAAAEQQLADNNESSRPHNLDSYADIGLVHDNSMSYTPSESQQQQDSHDIPGFSVSVFFLVYPTDWLINEIPCNAYDPPAGYDMSYLRQTTDETVRGQGLPSAQEGYGSHNSNNISNSTIPMVQQPPVSQMYPQVHVSHFSNLMPFRQFLSPVYVPPMPMPGYSSNPPYPHPSNGSSYLLMPGGGSHLNANSIKYGVQPFKPVPSGSPTGFGNFANPTGYAMNAPGMVGGATALEDSSRIKYKDNLYVPNPQAETSEIWIQNPRELPSMQSPQYYNMPGQTSHHAAYMLSHAGHASFNAAAAQSSHMQFPGMYHASPQPAAMASPHHHLGPAMGNNVGVGVAAASPGAQVGAYQQPQMGHLNWTTNF 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0234 852 MobiDBLite consensus disorder prediction 265 286 - -
Lele40g0234 852 MobiDBLite consensus disorder prediction 471 506 - -
Lele40g0234 852 MobiDBLite consensus disorder prediction 186 220 - -
Lele40g0234 852 SUPERFAMILY UBA-like 18 60 IPR009060 GO:0005515
Lele40g0234 852 MobiDBLite consensus disorder prediction 326 378 - -
Lele40g0234 852 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 312 852 - -
Lele40g0234 852 MobiDBLite consensus disorder prediction 490 504 - -
Lele40g0234 852 Pfam GBF-interacting protein 1 N-terminal 15 59 IPR009719 -
Lele40g0234 852 MobiDBLite consensus disorder prediction 425 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0234 Lele-ChrLele40 1851955 1857420 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0234 40 1851955 1857420 Lele40g0234 40 1851955 1857420 ECH
Lele37g0250 37 1988388 1993779 Lele40g0234 40 1851955 1857420 hybridization
Lele38g0250 38 1984402 1989998 Lele40g0234 40 1851955 1857420 hybridization