Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1174 ATGGGGTCTGGCTCGAGAATGGATGGTAGTGCACAGGTACTTCCTTTCAGACTGCGCAAAACCATCCAATCTATCAAAGAAATTGTGGGTAACCATTCTGACGCTGATATTTATGCGGCCCTTGAGGAAGCCAACATGGATCCTAATGAAACCATCCAGAAACTGCTCAACCAAGATCCATTCCATGAAGTGAAGAAAAGAAGGGACAGAAAGAAAGAGCCGCAAAGTGTTGGATACAAGGGTACCTCTGAACCGCAAAGACGTACTGACAATAACAGTCGCGGAATGAAGTTTCATGTTACTCCTGAACGTGCTTCTCAAAGAATAAACTATTCTCGAAATACTTTACCTGGCATCAGCAGAGAGTTTCGTGTTGTCAGAGATAACAGAGCAAATCATATATATAAAGTGAAGCCTCCTTCGGTTCAATGCTCAACATCCACCAATGTTCAATTAACTTCATCCGAAAAAGGATCATCAGCAGATTCCAGCAATAAAAAATCATCTGTTGCCAGTAAATCATCTCAGGTTCCAAATGGTCCTTCTGAATCACATACTAGGTACTCAGGTGACACTGTTTCTAATGCCATTGACAGACAAGGTTCATCTGAAGAGAAGCAAGTTATGACTCTAGATACCGCACTGCAGTTGCAACCAGTTAAGCCCAGCAATGTCCATCAAAATTCTGTGACAGTGGCATCATCTAGTTCTGCTGTTGGAGTATACTCTTCTTCTACAGATCCAGTTCATGTGCCTTCTCCTGATTCCAGATCATTAGGTGCTGTTGGAGCCATTGGGCGTGAAGTAGGGCTTGTTGGTGTTCGCCGACATTCTTCAGACAACTCATTGAAACAATCATCTGTTCCTAGTAGTTCTTATGCTAATTCACTTGTGGGGAAAGATGTTAGCAGATCATTCTTGAGCAATCACTATAACAATAGGCAACATCAACAATCTGTGGGACATCAGAGAGTATCGCATCACAACAAAGAGTGGAAACCTAAATCAAGCCAGAAGCTAAATGTTAGCAGTCCTGGAGTGATTGGAGCACCTAAAAAACCTGTTTCACCTGCCGAAAAATCTGAAGATGTAGAATCAGACACAGCAAAGCTTGAAGATAAACTTTCACAAGTAAATATATTTGAGAACCAAAATGTGATCATAGCGAAGCATATTCGTGTTCCAGAGACTGATCGTTGTCAGTTGACTTTTGGGACCATTGGGACTGGAGTTGATTCTTCTAGGCTTCAGCCTAATTGTCAACCCATAGGAACTGCTGAAAAATCAAATGAGGAGTCTGTAGCAAGCATGTCAGTACCAGCTCCGGAGTTGACCAGCGATGTTTCTGGAAGCAAGCAGGTGGATTTACAGGATGACCACATTCAAAGTACTGGATCTGACTCACCAGCATCTGCTGCTGCTGCTGCTGAGCAACAATTACCAGACAACAAGGAATCTTCAAGACCTCACAATCTTGACAATTATGCAGATATTGGGCTGGTACATGATAATAGAATGTCTTATACACCTTCAGAATCACAGCAGCAGCAGGATTCACATGATATGCCGGGCTTCTCGGCATATGATCCACCGACCGGGTATGACTTACCCTATATGAGACAGACTACAGATGAAACTGTACGAGTGCAGGGTCTGCCTTCTGCTCAGGAGGGTTATGGCTCTCATAATTCCAATAATATTGCTACCTCCACGATTCCCATGGTGCAACAACAGCCTCCAGTGGCACAGATGTATCCACAAGTTCATGTCTCACATTTCTCTAATCTTATGCCGTATCGTCAGTTTCTATCTCCCGTATATGTTCCACCAATGCCCATGACTGGATATTCAAGCAATCCTCCTTACCCTCATCCATCAAATGGCAGTAGTTACCTGATGATGCCTGGAGGCGGTTCTCATCTTAACGCCAACAGCATTAAATACGGGGTTCAGCAATTCAAGCCTGTTCCTTCTGGCAGTCCTACTGGGTTTGGAAATTTTACAAATCCAACTGGATATGCCATGAATGCCCCTGGTATGGTTGGAGGTGCAACTGCTCTAGAAGATTCATCTCGCATCAAATACAAGGATAATCTTTACGTCCCAAATCCCCAGGCTGAGACATCAGAAATCTGGATACAGAACCCAAGGGAGCTTTCCAGCATGCAATCACCTCAATACTACAACATGCCGGGGCAAACACCACATCACGCGGCTTACATGCCGTCTCATGCTGGCCATGCATCCTTCAATGCAGCGGCAGCACAATCCTCTCACATGCAGTTCCCGGGAATGTACCATGCTTCTCTGCAGCCGGCTGGCATGGCTAGTCCTCATCACCATTTAGGACCTGCTATGGGCAACAATGTTGGAGTAGGAGTGGCTGCTGCGGCACCTGGAGCTCAGGTAGGTGCATATCAGCAACCCCAAATGGGTCACCTCAATTGGACGACAAATTTCTGA 2463 0.4482 MGSGSRMDGSAQVLPFRLRKTIQSIKEIVGNHSDADIYAALEEANMDPNETIQKLLNQDPFHEVKKRRDRKKEPQSVGYKGTSEPQRRTDNNSRGMKFHVTPERASQRINYSRNTLPGISREFRVVRDNRANHIYKVKPPSVQCSTSTNVQLTSSEKGSSADSSNKKSSVASKSSQVPNGPSESHTRYSGDTVSNAIDRQGSSEEKQVMTLDTALQLQPVKPSNVHQNSVTVASSSSAVGVYSSSTDPVHVPSPDSRSLGAVGAIGREVGLVGVRRHSSDNSLKQSSVPSSSYANSLVGKDVSRSFLSNHYNNRQHQQSVGHQRVSHHNKEWKPKSSQKLNVSSPGVIGAPKKPVSPAEKSEDVESDTAKLEDKLSQVNIFENQNVIIAKHIRVPETDRCQLTFGTIGTGVDSSRLQPNCQPIGTAEKSNEESVASMSVPAPELTSDVSGSKQVDLQDDHIQSTGSDSPASAAAAAEQQLPDNKESSRPHNLDNYADIGLVHDNRMSYTPSESQQQQDSHDMPGFSAYDPPTGYDLPYMRQTTDETVRVQGLPSAQEGYGSHNSNNIATSTIPMVQQQPPVAQMYPQVHVSHFSNLMPYRQFLSPVYVPPMPMTGYSSNPPYPHPSNGSSYLMMPGGGSHLNANSIKYGVQQFKPVPSGSPTGFGNFTNPTGYAMNAPGMVGGATALEDSSRIKYKDNLYVPNPQAETSEIWIQNPRELSSMQSPQYYNMPGQTPHHAAYMPSHAGHASFNAAAAQSSHMQFPGMYHASLQPAGMASPHHHLGPAMGNNVGVGVAAAAPGAQVGAYQQPQMGHLNWTTNF 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1174 820 MobiDBLite consensus disorder prediction 60 113 - -
Lele39g1174 820 MobiDBLite consensus disorder prediction 139 206 - -
Lele39g1174 820 MobiDBLite consensus disorder prediction 315 369 - -
Lele39g1174 820 MobiDBLite consensus disorder prediction 425 473 - -
Lele39g1174 820 MobiDBLite consensus disorder prediction 425 494 - -
Lele39g1174 820 SUPERFAMILY UBA-like 18 75 IPR009060 GO:0005515
Lele39g1174 820 MobiDBLite consensus disorder prediction 240 259 - -
Lele39g1174 820 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 300 820 - -
Lele39g1174 820 MobiDBLite consensus disorder prediction 137 206 - -
Lele39g1174 820 MobiDBLite consensus disorder prediction 508 522 - -
Lele39g1174 820 MobiDBLite consensus disorder prediction 508 532 - -
Lele39g1174 820 Pfam GBF-interacting protein 1 N-terminal 15 73 IPR009719 -
Lele39g1174 820 MobiDBLite consensus disorder prediction 60 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1174 Lele-ChrLele39 20415418 20420873 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1174 39 20415418 20420873 Lele39g1174 39 20415418 20420873 ECH
Lele37g0250 37 1988388 1993779 Lele39g1174 39 20415418 20420873 hybridization
Lele38g0250 38 1984402 1989998 Lele39g1174 39 20415418 20420873 hybridization