Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0202 ATGTTTCAACCTGGAGCTCGCGACTCTCAAGAAACCAGAGGCGTCTCTAACATCCCAGTAGACATTATGGAAACTCCCAAAGAATACGTATTTTTCATGGACATCCCTGGCGTCTCCAAAATCGACATTCAGGTGACTGTGGAGGATGAGAACACGCTGGTGGTTCGAAGCAATGGGAAGAGGAAACGAGAAGAAGGGTGCAAGTACCCGAGGCTGGAGAGGAGAGCGCCTCAGAAGCTGCTGAGGAAGTTCCGATTGCCGGAGAATGCCAACGTGGTAGGCATCAATGCAAAATGTGAGAATGGTGTTCTCACTGTGACTGTTGAGAAGCACCCTCCACCTCCAAAATCCAAAACAGTTCAAGTTGCCATTGCCTGA 378 0.4947 MFQPGARDSQETRGVSNIPVDIMETPKEYVFFMDIPGVSKIDIQVTVEDENTLVVRSNGKRKREEGCKYPRLERRAPQKLLRKFRLPENANVVGINAKCENGVLTVTVEKHPPPPKSKTVQVAIA 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0202 125 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 11 125 IPR002068 -
Lele38g0202 125 Gene3D - 1 124 IPR008978 -
Lele38g0202 125 SUPERFAMILY HSP20-like chaperones 10 118 IPR008978 -
Lele38g0202 125 Pfam Hsp20/alpha crystallin family 21 122 IPR002068 -
Lele38g0202 125 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 9 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0202 Lele-ChrLele38 1597773 1599114 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0202 38 1597773 1599114 Lele38g0202 38 1597773 1599114 ECH
Lele38g0202 38 1597773 1599114 Lele39g1222 39 20871804 20873661 hybridization
Lele38g0202 38 1597773 1599114 Lele40g0190 40 1492450 1494245 hybridization