Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0190 ATGGATCTCCCCAGCCACAAATACTTTCGAGCTTCTCCTCTGTTGTCATCTTCACATGGGGTACTTTTCTTTTGCGTCTATTTGTTTGTTCTGTGCTTCTTCAATGTGATTCTCTATTCATTACCCTCTTTGGGGTCGGTGTTTCAGGAATTGGAGGGCAAAATAGACTTGTTTGAGAGGAGTAAAGAAAACCCATTTCCAGACCCACTTTGCAAGCTCAACCTCAGAGAGACCTCTGAGTTTGTTAAGGCATTTCCAATGTCGAATAATGCTGGAAGCACGGAAAGCAGAGGTTGTGGTATTATTCAGGGTTCGGCTCAGAGGAGAAGAGAAGAAGGGTCGAACTCCGTCACAAACAGGAGATTGGAGACTCCTTCTACTCCTGGTAGACCTGTTTTCTGCTTCACAAGCGTTGGAAATCACTCGAGGAAGAACTTTCCTTCGAAATGGGATGATGCAGAGAAGTGGCTCATAAGTAGCCCCTGCCATGAATCTCCTGCTCATTCTGTCAAGGGCTCAGAAAATTCAAACATTAGCAGCCAATGTGATAACTTTAAGAAACAAATGGAGGATCTCTCGGAGAAATCGAGGGTCACAGAAGAAAGGGCATCGAACGCTGTCCCAAGCTTTCAAGGGTCCGTGTCTTTGGACCACCATAACTCAGACATGGTTCTAAAAGACAAGTTCACAGACAATCCAGACCCTATTCTGCCTAAATTCAGATATTCAGAACCAACAAAAGAAGCGTTGCTTTACAGAAACCCTGGTAGCGAGGCGATGAAAGATGCTTGTACGGAAATGGTTCATGAGGTTCAACACAGAGATGTCGGAACAGAGATGACTCCTCTTGGAAGTTCAACCACTTCAAGGTGCCATACGCCCTTCAAGAGCTCATCCCCTGCTCGCCATAACACTCCAGCTAGTAGGTCAGGACCATTGGTTCTAGCAAACCAAAACGACACTAGCTGTACAATTGATGTTATTCAGCTGGAGGAGTGCCATTTCGCTAAACTGCAATTAGGTACACAGTATGGTTCAGTCACATCAAATTGGAGCTCAAGGGAGGAGGAGGAAGAGGAGATATCAAAGAGCTTGAGGCATAGCACCAGCCAGAAAGCTGATATAGACTGCAGAGCTGCTACATGGGAAGAGGAGGAAAAGACCAAGTGTTGCCTCAGGTATCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTTAATCTTCAAAGTGCAAAAGCAGAAGCTCAATCAAGAAAGCTTGAGGTGAAAATACAGAAGATGAAATCAAACCTAGAAGAGAAATTGATGAAGAGGATGGCAGCGGTTCACAGAAAAGCCGAGGAATGGAGAGAAGCAGCGAAACAGCAGCACCAAGAACAGATCCAGAAGGCGACAGAAAATGCTCAGAAGATGATGAACCGCCATAAACCGCATTTTTCAAATCACCGTTCGGGCGGTTGCTTCCCCTGCAATAATATCAGCCATCACTAA 1488 0.453 MDLPSHKYFRASPLLSSSHGVLFFCVYLFVLCFFNVILYSLPSLGSVFQELEGKIDLFERSKENPFPDPLCKLNLRETSEFVKAFPMSNNAGSTESRGCGIIQGSAQRRREEGSNSVTNRRLETPSTPGRPVFCFTSVGNHSRKNFPSKWDDAEKWLISSPCHESPAHSVKGSENSNISSQCDNFKKQMEDLSEKSRVTEERASNAVPSFQGSVSLDHHNSDMVLKDKFTDNPDPILPKFRYSEPTKEALLYRNPGSEAMKDACTEMVHEVQHRDVGTEMTPLGSSTTSRCHTPFKSSSPARHNTPASRSGPLVLANQNDTSCTIDVIQLEECHFAKLQLGTQYGSVTSNWSSREEEEEEISKSLRHSTSQKADIDCRAATWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEAQSRKLEVKIQKMKSNLEEKLMKRMAAVHRKAEEWREAAKQQHQEQIQKATENAQKMMNRHKPHFSNHRSGGCFPCNNISHH 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0190 495 MobiDBLite consensus disorder prediction 278 313 - -
Lele38g0190 495 Pfam Remorin, C-terminal region 378 475 IPR005516 -
Lele38g0190 495 Coils Coil 409 436 - -
Lele38g0190 495 MobiDBLite consensus disorder prediction 104 127 - -
Lele38g0190 495 MobiDBLite consensus disorder prediction 279 313 - -
Lele38g0190 495 MobiDBLite consensus disorder prediction 108 127 - -
Lele38g0190 495 Coils Coil 175 202 - -
Lele38g0190 495 PANTHER OS02G0116800 PROTEIN 96 487 - -
Lele38g0190 495 Coils Coil 453 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0190 Lele-ChrLele38 1515788 1519356 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0190 38 1515788 1519356 Lele38g0190 38 1515788 1519356 ECH
Lele38g0190 38 1515788 1519356 Lele39g1240 39 20979955 20982247 hybridization
Lele38g0190 38 1515788 1519356 Lele40g0182 40 1428994 1432558 hybridization