Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1240 ATGGATCTCCCCACCCACAAATACTTTCGAGCTTCTCCTCTGTTGTCATCTTCACATGGGGATTTGGCGGGCAAAATAGACTTGTTTGGGAGGAGTAAAGAAAACCCGTTTCCAGACCCACTTTGCAAGCTCAATCTTAGAGAGACCTCTGAGTTTGTCAAGTCATTCCCAATGTCGAATAATGCTGGAAGCACAGAAAGCAGAGGATGTAGTATTCTTCAGGGTTCGGCTCAGAGGAGAAGAGAAGAAGGGTCTAACTCTGTTACAAACAGGAGATTGGAGACTCCTTCTACTCCGGGTAGACCTGTTTTCTGCTTCACAAACGTTGGAAATCTCTCGAGGAAGAACTTTCCTTCGAAATGGGATGATGCAGAGAAGTGGCTCATAAGTAGCTCCTGCCATGAATCTCCTGCTCATTCTGTCAAGGTTTCCGAAAATTCAAACATTAGCAGCCAATGTGATAACTTTAAGAAACAAATGGAGGATCTCTCGGACAAATCGAGGGTCACAGAAGAAAGGGCATCGAACGCTGTCCCAAGCTTTCAAGGGTCCGTATCTTTGGACCACCATAACTCAGACATGGTTCTAAAAGACAAGTTCACCGACAATCCAGACCCTATTCTGCCTAAATTCAGATATTCAGAACCAACACAAGAGGCGTTTCTTTTCAGAAACCCTGGTAGCGAGGCAATGAAAGATGCTTGCACGGAAATGGTTCATGAGGTTCAACAAAGAGATGTTGGGACAGAGATGACTCCTCTTGGAAGTTCAACCACTTCAAGGTGCCACACACCCTTCAAGAGTTCATCCCCTGCTCGCCATAACACTCCAGCTAGTAGGTCAGGACCATTGGTTCTAGCAAACCAAAACGACACTAGCTGTACAATTGATGTTATTAAGCTCGAGGAGTGCCATTTCGCTAAACTGCAATTGGGAACACAGTATGGTTCAGTCACATCAAATTGGAGCTCAAGGGAGGAGGAGGAAGAGGAGATATCAAAGAGCTTGAGGCATAGCACCAGCCAGAAAGCTTATATGAACTGCAGAGCCGCTACATGGGAAGAAGAGGAAAAGACCAAGTGTTGTCTCAGGTATCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTTAATCTCCAAAGTGCAAAAGCAGAAGCTCAATCAAGAAAGCTTGAGCTTATATCTAGTAGGAACTTGCACTCTTGCAAGCAGTTGAACAGTGAAAGTGGAGATAAGTCCAGATTACTGTGTCTTGCGCATGGATTGGCCTTGTAA 1272 0.4505 MDLPTHKYFRASPLLSSSHGDLAGKIDLFGRSKENPFPDPLCKLNLRETSEFVKSFPMSNNAGSTESRGCSILQGSAQRRREEGSNSVTNRRLETPSTPGRPVFCFTNVGNLSRKNFPSKWDDAEKWLISSSCHESPAHSVKVSENSNISSQCDNFKKQMEDLSDKSRVTEERASNAVPSFQGSVSLDHHNSDMVLKDKFTDNPDPILPKFRYSEPTQEAFLFRNPGSEAMKDACTEMVHEVQQRDVGTEMTPLGSSTTSRCHTPFKSSSPARHNTPASRSGPLVLANQNDTSCTIDVIKLEECHFAKLQLGTQYGSVTSNWSSREEEEEEISKSLRHSTSQKAYMNCRAATWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEAQSRKLELISSRNLHSCKQLNSESGDKSRLLCLAHGLAL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1240 423 MobiDBLite consensus disorder prediction 57 99 - -
Lele39g1240 423 Coils Coil 146 173 - -
Lele39g1240 423 MobiDBLite consensus disorder prediction 245 284 - -
Lele39g1240 423 Pfam Remorin, C-terminal region 349 391 IPR005516 -
Lele39g1240 423 PANTHER OS02G0116800 PROTEIN 67 391 - -
Lele39g1240 423 MobiDBLite consensus disorder prediction 249 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1240 Lele-ChrLele39 20979955 20982247 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1240 39 20979955 20982247 Lele39g1240 39 20979955 20982247 ECH
Lele37g0182 37 1473041 1476414 Lele39g1240 39 20979955 20982247 hybridization
Lele38g0190 38 1515788 1519356 Lele39g1240 39 20979955 20982247 hybridization