Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0182 ATGGATCTCCCCAACCACAAATACTTCCGAGCTTCCCCTCTGTTGTCATCTTCACATGGGGAATTGGAGGGCAAAATAGATTTGTTTGGGAGGAGTAAAGAAAACCCATTTCCAGACCCACTTTGCAAGCTCAACCTCAGAGAGACCTCTGAGTTTGTCAAGGCATTTCCAATGTCCAATAATGCTGGAAGCACGGAAAGCAGAGGTTGTGGTATTCTTCACGCTTCGGCTCAGAGGAGAAGAGAAGAAGGGTCGAACTCCGTCACAAACAGGAGATTGGAGACTCCTTCTACTCCTGGTAGACCTGTTTTCTGCTTCACAAGCGTTGGAAATCTCTCGAGGAAGAACTTTCCTTCGAAATGGGAGGATGCAGAGAAGTGGCTCATAAGTAGCTCCTGCCATGAATCTCCTGCTCATTCTGTCAAGGGCTCAGAAAATTCAAACATTAGCAGCCAATGTGATAACTTTAAGAAACAAATGGAGGATCTCTCGGAGAAATCGAGGGTCACAGAAGAAAGGGCATCGAACGCTGTCCCAAGCTTTCAAGGGTCCGTGTCTTTGGACCACCATAACTCAGACACGGTTCTAAAAGACAAGTTCACAGAAAATCCAGACCCTATTCTGCCTAAATTCAGATATTCAGAACCAACAAAAGAAGCGTTTCTTTTCAGAAACCCTGGTAGCGAGGCAATGAAAGATGCTTGCACGGAAATGGTTCATGAGGTTCAACACAGAGATATCGGAACAGAGATGACTCCTCTTGGAAGTTCAACCACTTCAAGGTGCCATACACCATTCAAGAGCTCATCCCCTGCTCGCCATAACACTCCAGCTAGTAGGTCAGGACCATTGGTTCTAGCAAACCAAAACGACACTAGCTGTACAATTGATGTTATTCAGCTGGAGGAGTGCCATTTCGCTAAACTGCAATTAGGTACACAGTATGGTTCAGTCACATCAAATTGGAGCTCAAGGGAGGAGGAAGAAGAGGAGATATCAAAGAGCTTGAGGCATAGCACCAGCCAGAAAGCTGATATAGACTGCAGAGCTGCTACATGGGAAGAGGAGGAAAAGACCAAGTGTTGCCTCAGGTATCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTTAATCTCCAAAGTGCAAAAGCAGAAGCTCAATCAAGAAAGCTTGAGGTGAAAATACAGAAGATGAAATCAAACCTAGAAGAGAAATTGATGAAAAGGATGGCAGCCGCTCACAGAAAAGCTGAGGAATGGAGAGAAGCAGCGAAACAGCAGCACCAAGAGCAGATCCAGAAGGCGACAGAAAATGCTCAGAAGATGATGAACTGCCATAAACCGCATTTTTCAAATCACCGTTCGGGCGGTTGCTTCCCCTGCAATAATATCAGCCTTCACTAA 1401 0.4554 MDLPNHKYFRASPLLSSSHGELEGKIDLFGRSKENPFPDPLCKLNLRETSEFVKAFPMSNNAGSTESRGCGILHASAQRRREEGSNSVTNRRLETPSTPGRPVFCFTSVGNLSRKNFPSKWEDAEKWLISSSCHESPAHSVKGSENSNISSQCDNFKKQMEDLSEKSRVTEERASNAVPSFQGSVSLDHHNSDTVLKDKFTENPDPILPKFRYSEPTKEAFLFRNPGSEAMKDACTEMVHEVQHRDIGTEMTPLGSSTTSRCHTPFKSSSPARHNTPASRSGPLVLANQNDTSCTIDVIQLEECHFAKLQLGTQYGSVTSNWSSREEEEEEISKSLRHSTSQKADIDCRAATWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEAQSRKLEVKIQKMKSNLEEKLMKRMAAAHRKAEEWREAAKQQHQEQIQKATENAQKMMNCHKPHFSNHRSGGCFPCNNISLH 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0182 466 Coils Coil 146 173 - -
Lele40g0182 466 PANTHER OS02G0116800 PROTEIN 67 458 - -
Lele40g0182 466 MobiDBLite consensus disorder prediction 250 286 - -
Lele40g0182 466 Pfam Remorin, C-terminal region 349 445 IPR005516 -
Lele40g0182 466 Coils Coil 380 444 - -
Lele40g0182 466 MobiDBLite consensus disorder prediction 77 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0182 Lele-ChrLele40 1428994 1432558 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0182 40 1428994 1432558 Lele40g0182 40 1428994 1432558 ECH
Lele37g0182 37 1473041 1476414 Lele40g0182 40 1428994 1432558 hybridization
Lele38g0190 38 1515788 1519356 Lele40g0182 40 1428994 1432558 hybridization