Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1286 ATGTGTTCTTTTACTCCTCCGTCAACGCCACGTGTAATCGGATCCGCTCTGCAATTTTTTCGCAGTCACATATTTGGATTTTGGGCCCACCTCTATAAAAGTGGCTTTACCTTACCGCATCTGAGAGAATTTAATTTGCATTCCGAGCCCCTAACTAACAAAAAGCTGTATTTGTTTGTAGAACCCAGGAAGCTACACACCACGCAACTTCGCTGTGATCACTATCTCGTCGTTACCTTCACTCGGCGAGTGATGGAAGCTTTTACGAGTTCTTGCTCTAAGGCTCTTTTTGATGGCCTTGGATCTTCTTCTCCGAGGCTTGTTTCTTCCTTTCATTTCTCCGACAGGCTTCAATTTTCCTTATCCAATGATAAAGTCGGCAACTTTCGGCTCCTTCAAATGGTTCAAAACAAGGGTGTCTCGATTTCCCCAGTTCATGCCATGCCATCTGAACCCCAGGTGGAATTGGAAACTGAAGAGCCTCAAGCACAGCAAACTGAGGAAACGAAGGTTGTTCGGATCAAATTTCAGTTACAAAAAGATTGCAAGTTCGGCGAACAATTCCTTGTTGTAGGTGATGATCCTATGGTTGGTGATTGGGATCCTTCAAATGCACTACCAATGACCTGGTCAGAAGGGCATAAATGGTTTGTTGAGATGGATGTGCCTTCTGGGAAATCAATCCAATACAAGTTTATTCTGAAATCAACATCTGGTGATATTGTTTGGCAGCCGGGGTCTGACCGAATTGTTAAGACTTGGGATACTGTTAACAGAATAACTGTTTGTGAGGATTGGGAGAATGCTGAGCTTCAGAAAATAATAGAGGAAGATCAATCTGATTACTCAAATGGGGAACCCCTGATTGATTCAGAAATGTCAAATTTTTCTGGGAATTTGGATCATCCCGAAGAAGAGACAGTATCTGATGCAACCGATGCACTAGACTTTGAAGGCATCAAAACTCATTTAGAGGAGAAACCACTTGCTCAACCAGTCATGCAACAAGTTACAGGTGATATTACTTCTTCTTCTTCCATGGAGAAGCCAATGGCGATTGTTGCAGAAAATATAGATTCATCGGAAGATGCCCCCAAGAATACGCCTCGCAGAAGAGGTGTGAACAATATGGCCCTTCAGAGTGAAGTTAAAGTCCATGATCTTGAAAACATGGGAAAAGCTTCACAAATAAATAATCAGGAAAAGGAAGTTGTGAAGAGCAACCTATTTGAATTTGAAGGAAGTCCTATTCTTGTACCTGGCTTGACTACACCTAAAACTGAGGAAACAACTAATAATGATAAAGTTGAAGAGAGGATTACCATGGACACTTCAGTTGAAGAACTTGAAACCAAGGATCAGAACATGCCAGAGTTCAATGAGGAACAAGAAGAATCAGATGATGGGTTCCAGTTCAATGAGGAGGAGCAAGAAGAATCAGAAGATGCAAAACCCCAAGAGATAGCTGAAATACTACTCAGTGATGAGCCAGAGCTGGTTGACAACGATTTTCAAGAGAAGTTTCATTCAACCACAGCAATAGTTAAACTACCTGAGGTTCACACGGCTCATGAAAATGTCTTGGAAAGTGACATTCAATGGGGCCGTGGAATATTAAAGAAGCTTCTATCAAAGCTCGGATTGCTGAGAAAAATTCTTCAGTAG 1665 0.4186 MCSFTPPSTPRVIGSALQFFRSHIFGFWAHLYKSGFTLPHLREFNLHSEPLTNKKLYLFVEPRKLHTTQLRCDHYLVVTFTRRVMEAFTSSCSKALFDGLGSSSPRLVSSFHFSDRLQFSLSNDKVGNFRLLQMVQNKGVSISPVHAMPSEPQVELETEEPQAQQTEETKVVRIKFQLQKDCKFGEQFLVVGDDPMVGDWDPSNALPMTWSEGHKWFVEMDVPSGKSIQYKFILKSTSGDIVWQPGSDRIVKTWDTVNRITVCEDWENAELQKIIEEDQSDYSNGEPLIDSEMSNFSGNLDHPEEETVSDATDALDFEGIKTHLEEKPLAQPVMQQVTGDITSSSSMEKPMAIVAENIDSSEDAPKNTPRRRGVNNMALQSEVKVHDLENMGKASQINNQEKEVVKSNLFEFEGSPILVPGLTTPKTEETTNNDKVEERITMDTSVEELETKDQNMPEFNEEQEESDDGFQFNEEEQEESEDAKPQEIAEILLSDEPELVDNDFQEKFHSTTAIVKLPEVHTAHENVLESDIQWGRGILKKLLSKLGLLRKILQ 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1286 554 SMART CBM_20_2 171 263 IPR002044 GO:2001070
Lele37g1286 554 FunFam Related to glucoamylase 164 268 - -
Lele37g1286 554 MobiDBLite consensus disorder prediction 460 483 - -
Lele37g1286 554 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 166 268 IPR002044 GO:2001070
Lele37g1286 554 PANTHER STARCH-BINDING DOMAIN-CONTAINING PROTEIN 1 170 274 - -
Lele37g1286 554 MobiDBLite consensus disorder prediction 430 459 - -
Lele37g1286 554 Pfam Starch binding domain 172 258 IPR002044 GO:2001070
Lele37g1286 554 Gene3D Immunoglobulins 169 267 IPR013783 -
Lele37g1286 554 MobiDBLite consensus disorder prediction 420 485 - -
Lele37g1286 554 SUPERFAMILY Starch-binding domain-like 170 265 IPR013784 GO:0030246
Lele37g1286 554 CDD CBM20 173 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1286 Lele-ChrLele37 22033377 22036445 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1286 37 22033377 22036445 Lele39g0120 39 809746 812555 hybridization
Lele37g1286 37 22033377 22036445 Lele40g1127 40 21395306 21398162 hybridization