Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1191 ATGGCGGCAGAGCCACCTCCACCGTCGGAGATCCAACTGAGGATCAATTCTCGGAAGAACGACAATGTGATACACCCAGTGGAGGCAGGTGTGGCTCTACCCTATTCAACAACTAGAACGCCAGTAGAATACACCGAAGTAAAGCATCTCAAGAGATGGTTTTCCTGGCTAATTCCTGTCATTGTTATTGCCAACATAGCTGTGTTCGTAATTACCATGTACGTCAACAATTGCCCCAAAAACTCTGTCTCTTGCGTTGCCCGCTTCCTCGGTCGTTTCTCCTTTCAGACGCTCAAAGAGAACCCTCTTCTCGGGCCTTCTTCATTAACGCTACAGAAGATGGGAGCTCTTGACGTAGGTAGAGTGGTTCACAGACACCAGGGTTGGCGCCTTATCACTTGCATGTGGTTACATGGTGGTGTCTTCCATCTATTGGCAAATATGTTGGGTATTCTGATCATTGGGATCCGCCTTGAGCAAGAATTTGGATTCTTGCGTATTGGATTGCTATTTTTGATTTCTGGATTTGGGGGAAGTTTGCTTTCTTCTCTATTCATTCAGTCAAACATCTCTGTGGGTGCCTCTGGGGCTCTTTTTGGATTGCTGGGAGGCATGCTCTCTGAACTTATTACTAATTGGTCTATGTATGATAACAAGTTTGCAGCACTCTTCACTCTTGTGATTATCGTTGCGGTCAATCTAGCTGTAGGGATCCTCCCACATGTGGACAATTTTGCTCATATTGGAGGATTTATTACGGGATTTCTTCTTGGATTTGTGTTTCTGATCCGTCCTCAGTTTGGCTGGGTTAACCAAAGATATGCTTCTCCAGATTACTCTTCTGCCTCAGTTAGAAGATCTAAGTTCAAAAAATACCAGAGCATCTTATGGATCCTCTCTCTGATCCTTGTCATTGCTGGAATTGCTGTTGGCCTTATTGCACTTCTCCGTGGTGTTGATGCCAATGATCATTGTTCTTGGTGCCATTATCTATCTTGTGTCCCAACTTCAAGATGGAGCTGCAATAACGAACCTGGATCTTGTCTTACATCCCAACTTGGCAGTCAGCTGAACATAACTTGCTCAAACAATGGGAAATCCAGTACATATTTGATTCAAGATCCAACCGATTCACAGATTCAGCAGCTGTGCACTCAGCTTTGCGCTTGA 1170 0.447 MAAEPPPPSEIQLRINSRKNDNVIHPVEAGVALPYSTTRTPVEYTEVKHLKRWFSWLIPVIVIANIAVFVITMYVNNCPKNSVSCVARFLGRFSFQTLKENPLLGPSSLTLQKMGALDVGRVVHRHQGWRLITCMWLHGGVFHLLANMLGILIIGIRLEQEFGFLRIGLLFLISGFGGSLLSSLFIQSNISVGASGALFGLLGGMLSELITNWSMYDNKFAALFTLVIIVAVNLAVGILPHVDNFAHIGGFITGFLLGFVFLIRPQFGWVNQRYASPDYSSASVRRSKFKKYQSILWILSLILVIAGIAVGLIALLRGVDANDHCSWCHYLSCVPTSRWSCNNEPGSCLTSQLGSQLNITCSNNGKSSTYLIQDPTDSQIQQLCTQLCA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1191 389 Pfam Rhomboid family 123 264 IPR022764 GO:0004252|GO:0016020
Lele37g1191 389 Gene3D - 50 264 IPR035952 -
Lele37g1191 389 SUPERFAMILY Rhomboid-like 53 266 IPR035952 -
Lele37g1191 389 PANTHER RHOMBOID-RELATED 43 341 IPR002610 GO:0004252|GO:0006508|GO:0016020
Lele37g1191 389 FunFam RHOMBOID-like protein 51 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1191 Lele-ChrLele37 21330000 21333212 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1191 37 21330000 21333212 Lele39g0222 39 1470996 1474391 hybridization
Lele37g1191 37 21330000 21333212 Lele40g1016 40 20523684 20526507 hybridization